FFCP PHASE1:Hg19::chr5:125695772..125695781,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z6D8,Q96HH9 | |||
|association_with_transcript=-6bp_to_NM_001146319,uc011cwt.1_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_30_at_GRAMD3_5end | |||
|id=chr5:125695772..125695781,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.04e-25!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.23e-66;3!CL:0000349;3.42e-11;19!CL:0000083;9.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.23e-66,3;CL:0000349,3.42e-11,19;CL:0000083,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.07e-23;1 | |||
|ontology_enrichment_disease=DOID:3371!5.28e-09!1;DOID:4549!5.28e-09!1;DOID:5861!5.28e-09!1;DOID:6496!5.28e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:4074;3.06e-12;2!DOID:4905;3.06e-12;2!DOID:3498;3.06e-12;2!DOID:1793;9.36e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,3.24e-12,2;DOID:4905,3.24e-12,2;DOID:3498,3.24e-12,2;DOID:1793,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.04e-25!3;UBERON:0000920!1.04e-25!3;UBERON:0005631!1.10e-20!14;UBERON:0000158!1.10e-20!14;UBERON:0003124!2.09e-19!7;UBERON:0000478!7.13e-12!24;UBERON:0001282!3.25e-09!1;UBERON:0009842!3.25e-09!1;UBERON:0003704!3.25e-09!1;UBERON:0001171!3.25e-09!1;UBERON:0001172!3.25e-09!1;UBERON:0001882!5.72e-09!1;UBERON:0005403!5.72e-09!1;UBERON:0002394!9.25e-09!4;UBERON:0003928!9.25e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.23e-66;3!UBERON:0000920;1.23e-66;3!UBERON:0005631;1.28e-20;10!UBERON:0000158;1.28e-20;10!UBERON:0000478;3.06e-15;24!UBERON:0001987;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.23e-66,3;UBERON:0003124,6.95e-51,7;UBERON:0005631,9.22e-26,14;UBERON:0000158,9.22e-26,14;UBERON:0000478,3.06e-15,24;UBERON:0001987,6.50e-07,4;UBERON:0004340,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630809660135739,1.05427273493442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0.760531603454056,2.55200927785536,2.10674464824283,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3854323049959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52382087829458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p30@GRAMD3 | |||
}} |
Revision as of 07:08, 22 January 2014
Short description: | p30@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_GRAMD3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -6bp_to_NM_001146319, uc011cwt.1_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z6D8Q96HH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.23e-66 | 3 |
extraembryonic cell | 3.42e-11 | 19 |
epithelial cell of pancreas | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.23e-66 | 3 |
chorion | 6.95e-51 | 7 |
extraembryonic membrane | 9.22e-26 | 14 |
membranous layer | 9.22e-26 | 14 |
extraembryonic structure | 3.06e-15 | 24 |
placenta | 6.50e-07 | 4 |
allantois | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 3.24e-12 | 2 |
pancreatic carcinoma | 3.24e-12 | 2 |
pancreatic ductal adenocarcinoma | 3.24e-12 | 2 |
pancreatic cancer | 9.63e-07 | 4 |