FFCP PHASE1:Hg19::chr6:36644267..36644294,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1784 | |||
|TSSclassifier=strong | |||
|UniProt=P38936,Q6FI05 | |||
|association_with_transcript=0bp_to_NM_078467_5end | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_4_at_CDKN1A_5end | |||
|id=chr6:36644267..36644294,+ | |||
|ontology_enrichment_celltype=CL:0002321!5.43e-13!248;CL:0000220!1.17e-12!246;CL:0000221!1.92e-09!71;CL:0000066!2.28e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.40e-08;4!CL:0000731;3.40e-08;4!CL:0002577;1.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.29e-08,4;CL:0000731,2.29e-08,4;CL:0002321,1.01e-07,250;CL:0002577,1.56e-07,3;CL:0000066,4.95e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.78e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,6.94e-09,4;UBERON:0004340,6.94e-09,4;UBERON:0003124,1.52e-07,7;UBERON:0006554,6.50e-07,47 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,2.09340350391728,0.218441372130172,0,0,0.331397375727916,1.34465029290355,1.80808358407193,3.65155045193687,1.46379839637152,0.369363174230364,0.408001382488506,0,0,0.684372125364421,0.125542639594803,1.06978768047132,0.985207073399349,0.708397031823113,0,0,0.154816123316076,0.919421224478927,0.30120591877825,2.21852406100073,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.472674085820339,0.443458794925128,0.351339142772504,0.0654895377488563,1.45718115317017,2.96627554227544,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0.550236083880135,0.626984899610432,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0.976248230192678,0.367663080345869,0.81014194788176,0.17859945656816,0,0.112611480483322,0,1.89853131913626,0.549605231791222,0,0,0.436094052142534,0,0,1.58891016975863,0.286836620748814,1.06400514659507,0,0,2.96001058100592,0,0,0.163461903113459,0.302714855289863,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0,0.336672227908132,0,0.554128230968366,0,0,0.300476117813194,0.226864366320042,0.358779271377724,1.2813443329114,0.423863802319124,0,0.206105058476878,0.515281080091258,1.30281799432113,0.168776332241266,0.194874010322397,0.252433774244115,0.644349290496095,0.969876340912871,2.13005755509969,0.403008392910561,0.67824236924195,0.193260853163297,1.09098448236334,0.286804595389004,0.121973706129595,0.927708378250397,0.69716365721711,3.73179798055334,0.504641701751257,0.72995471815166,0,0,1.38134921352481,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,1.02940686179115,0.658501712451753,2.24803506515239,0.502644862058154,1.66659201285353,1.3032332212413,0,0,1.27523445472584,2.23076519048061,0,0.925971025153221,0.380508304469197,1.58040879591855,0,0.246217006087397,0,0,0.93733833986777,0.839910640994298,0.425325291727159,2.7763142037883,2.03443756959773,0.766765358330422,0,0,0,0,0,0.063497894292169,0,2.34434894420094,0,0.102827492703324,0.600686115687835,0.285826432630578,0.112131084345361,0,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0,0,1.62786481617433,0.823240336780769,0,0.355391948742546,0,0.904318131178758,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.27047312111232,1.30139853857622,0,1.50764638800914,0,0,0,0,0.12269149171914,0,0.813795071099207,0.207970861530807,0.713715955188647,0.946214490203608,0.35142424497814,0.902838299183157,0,1.03473071292505,0,0.368738337083406,0.347534457872331,0.587403472388222,0,0,0,0,2.12189300012382,6.65741758041988,4.83824469327489,0.744323423456331,0.767309866440312,0.561320188866147,1.02511319404561,0,1.60853921143608,2.96836132889982,0,0.710246901252508,0.0821271560138091,0,0.348631135379878,0,1.00253235151642,7.09023614806402,0.68888668898764,0.546273504020151,0.262248829918848,0,0.616122696835318,0.784349769176855,0,0.105551628892876,0,1.02056223165909,0.431831832204279,1.54227252690289,0.541892875087706,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0.769350375349168,0.984043937099117,0.325378394664303,0.515205058238611,0,0.165018999841176,1.14853107599234,0,0,1.16004861950546,0,0,0,0.537101224341368,0,0.255679882248303,2.04773681987496,0.495854746082934,0.768760269460425,1.78657797492418,1.8208400553999,1.39453664789186,0.62962469366128,0.6970372701606,0.616067160352178,0,0.869932992075073,0.18532421910392,0.858749320451947,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0,0,0.202182481573316,0,0,0.975267478179181,0,0,0.545999645631943,0.424216295861138,0,1.10273068709225,0,0,1.15755106853338,0,1.42037263873893,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,1.92444225451024,0.670302275535787,1.08890984861323,0.470719003883896,2.58303223602738,1.68471475667626,2.66058092122005,1.1486170010348,0,0,0,0,0,0,0,0,2.24330549367694,7.69983884210687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,1.46508179271894,0,0,0,0.23874448473769,4.75143489332222,0,0,0,0,0,3.58913193817589,0.796991953004279,0,0,0.102268682502155,0.861593638227486,0.933118762985422,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0.295547618953547,0.87754158861589,0.10893846351899,0.139423744278603,0,0,0.23056390438806,8.07818799687949,0,0.31900115973192,2.83952539545773,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,2.6686901581256,0.741383633679017,1.25306339406546,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0.751617097072463,0.518440956986236,0,0,0,0,0,0.138674673013139,1.04135843001079,0,0.174118413160805,0.873633341210151,0.51595809741485,0,0,0,0.484945082442097,0.353024506766001,0.225980740780532,0.685209623233754,0,0,0,0,0.426905989478705,0,0.576361668616424,0.114536596165916,0,0,0.49701014226173,1.17847017308398,0.407712618220842,0.104602846312333,0,0,0.600420288709789,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.335917362433631,0.360299883542404,0,3.15132729228895,3.54388191039016,3.84200199968854,0,0,0,0,0.482259445395058,2.47570985875021,0.83088067605837,0.2249738915515,0,0,0.335434687599266,0.315222829196793,0,0,0,3.26255835443057,0.714695326373367,0.662091970365432,1.017074150619,0,0.864221491201268,0.979762080328227,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,1.14681839138014,2.5513681853476,0.18628920882415,1.66018361923477,0.499921631848426,0,0,0,1.40500471742064,0,0.447764408660622,0.701139929541673,0.554805861502613,0.378806010550178,0.50313580350515,0,4.57680136793847,0.756154618816195,0.15543720058278,0,0.318593534327405,0,0,0,1.06336685823198,0,0.300515217994437,0.761610424337591,0,0.363697318405119,0.214821114084977,0,0,0.400027764663154,0,0,1.26184898228651,0,0,0,0.226705925512272,0.231522474323834,0,0.537266523244462,0.617602894321944,0,1.59020231351293,0,0,0.256241518587947,1.0362910251936,0,0,0,0,0,0,0,0,2.19986135440423,0,0,0,0,2.93746966210833,0,1.02315497042921,2.26432103933032,0,3.05786986937639,0,0,0.619678821295011,0,0,0,0.80057074828547,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.115525666150338,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.127762427639595,0.535701835878287,0,0,0.455324382702595,1.1531308121143,0.230467975111559,0,0.0679697329768317,0,0,0,0.627944742804112,0,0.280272163313789,0,0.215927591218621,0,0,28.1264228884253,0.23248285073625,0,0,0.828864656652147,2.7314956335032,2.07377898544228,0,0.828324005113957,0.596493833314104,0,0,0,0,3.80308468112494,0,0.731507549893617,1.29485767437579,3.2852098193999,2.3196288626764,0.485710993059139,0.233939463462106,0.198950775161368,0,0.90356865631168,0,1.35866559210006,0,0,0,0,0,0,0,0,0,0,0,0.799529247399431,0,2.11736923029415,0,0,0.458729283404541,0,0.473314686579554,0.203974470572744,0,0,0.371995018166751,0.462175628631418,0,0.252332849670158,0,6.96841755562903,0.407955318967927,0.26721740526556,3.03253168464988,0.250707539292375,0.0757786982182394,0.267964130156178,0.829169439458779,0.103432995861895,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.318235791390825,0.202117188958219,0.435433495793923,2.73786640868225,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | |||
|short_description=p4@CDKN1A | |||
}} |
Revision as of 11:39, 22 January 2014
Short description: | p4@CDKN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDKN1A_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_NM_078467_5end |
EntrezGene: | CDKN1A |
HGNC: | 1784 |
UniProt: | P38936Q6FI05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.29e-08 | 4 |
urothelial cell | 2.29e-08 | 4 |
embryonic cell | 1.01e-07 | 250 |
placental epithelial cell | 1.56e-07 | 3 |
epithelial cell | 4.95e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
placenta | 6.94e-09 | 4 |
allantois | 6.94e-09 | 4 |
chorion | 1.52e-07 | 7 |
urinary system structure | 6.50e-07 | 47 |