FFCP PHASE1:Hg19::chr6:37665472..37665497,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=266727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19267 | |||
|TSSclassifier=weak | |||
|UniProt=Q8NFP4 | |||
|association_with_transcript=268bp_to_ENST00000297153,ENST00000434837,NM_153487,uc003onu.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_MDGA1_5end | |||
|id=chr6:37665472..37665497,- | |||
|ontology_enrichment_celltype=CL:0000057!8.34e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.45e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!5.47e-08!86;UBERON:0007284!5.47e-08!86;UBERON:0000153!1.48e-07!129;UBERON:0007811!1.48e-07!129;UBERON:0001049!1.79e-07!57;UBERON:0005068!1.79e-07!57;UBERON:0006241!1.79e-07!57;UBERON:0007135!1.79e-07!57;UBERON:0002346!2.24e-07!90;UBERON:0000033!2.87e-07!123;UBERON:0002616!3.76e-07!59;UBERON:0007023!3.98e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.18e-09;2!UBERON:0002757;1.18e-09;2!UBERON:0010134;1.18e-09;2!UBERON:0005408;1.18e-09;2!UBERON:0001899;1.18e-09;2!UBERON:0004457;3.59e-07;9!UBERON:0000042;3.59e-07;9!UBERON:0002037;4.68e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.20e-09,2;UBERON:0002757,1.20e-09,2;UBERON:0010134,1.20e-09,2;UBERON:0005408,1.20e-09,2;UBERON:0001899,1.20e-09,2;UBERON:0002037,4.67e-07,6;UBERON:0006215,4.67e-07,6 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,2.00146596706261,0.893922188854576,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0.369363174230364,0,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0.768482119587302,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0.334231370655521,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,1.24930726552346,0,0,0,0,0.724122019413995,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0.850813354476611,0.221729397462564,0.614843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.926864265692532,0.573673241497627,0,0.560677600142307,1.06748995729705,0,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,0,0.122834317311768,0,1.18800285728205,1.23633464639278,0.910161361938026,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,1.35214253015937,0,0.358779271377724,0.213557388818567,0,0.300091096084402,0.309157587715317,0.515281080091258,0.558350568994769,0.337552664482532,0.389748020644795,0.504867548488229,0.184099797284599,0.161646056818812,1.06502877754984,0.302256294682921,0.169560592310488,0.386521706326594,0,0.573609190778008,0,0,0,0.310983165046111,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0,0,0,1.44331342025273,1.27523445472584,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,1.96843472305724,2.67391897890794,1.17217447210047,0,0.102827492703324,0,0.571652865261156,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0.289562613335158,0,0,0.784596007954691,0,0,0.128343036279748,0.76228387266739,1.30139853857622,1.54657762555539,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.937131319941706,0.902838299183157,2.27407504055985,1.03473071292505,0,0.184369168541703,0,0.391602314925481,1.37257369524342,0,0,0.106727557803444,0,0,0,0.744323423456331,1.38115775959256,0.561320188866147,0.128139149255701,1.02341449813341,0,0,0.308419387605311,1.06537035187876,0.328508624055237,0,1.04589340613963,0,0,0.184161977871793,0.229628896329213,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.623224249527161,0,0.192190067365106,0.255225424989168,0,0,1.5740617341532,0,0,0,0,0.18532421910392,0.572499546967965,0,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,1.99031692572366,0.438450885253763,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,1.05553817648832,1.31717957183961,0,0.699869440489966,0,0,0,0.376575203107117,0,1.68471475667626,0,0,0,0,0,0.476463550915578,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0.144269212976445,0,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,1.68900326502395,0.796991953004279,0,0,0.715880777515084,0.123084805461069,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,7.62908681585416,11.6108222927786,6.79759523593159,0.438770794307945,0,0.278847488557207,1.07730361905316,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0.995261931078505,0.176915129006678,0,0.593042257361244,0,0.313265848516366,0.337005664903385,0,0.468528891450678,0,0,0.242780379534093,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0.34945333648406,0,0,0,0,0.387956065953678,0.529536760149002,0.677942222341597,0,0,0.379864775735272,0,0,0.213452994739353,0,0.432271251462318,0.229073192331831,0,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.295282444544246,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0.410462603746695,0.340776043570843,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,1.22021956690538,0.18628920882415,0,0,0.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| |||
|short_description=p3@MDGA1 | |||
}} |
Revision as of 11:45, 22 January 2014
Short description: | p3@MDGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MDGA1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 268bp_to_ENST00000297153, ENST00000434837, NM_153487, uc003onu.1_5end |
EntrezGene: | MDGA1 |
HGNC: | 19267 |
UniProt: | Q8NFP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.20e-09 | 2 |
regional part of epithalamus | 1.20e-09 | 2 |
secretory circumventricular organ | 1.20e-09 | 2 |
circumventricular organ | 1.20e-09 | 2 |
epithalamus | 1.20e-09 | 2 |
cerebellum | 4.67e-07 | 6 |
rhombic lip | 4.67e-07 | 6 |