FFCP PHASE1:Hg19::chr6:113754604..113754624,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000421737_5end | |||
|description=CAGE_peak_1_at_ENST00000421737_5end | |||
|id=chr6:113754604..113754624,- | |||
|ontology_enrichment_celltype=CL:0002541!3.45e-14!3;CL:0002251!3.88e-07!21;CL:0002076!7.56e-07!43;CL:0002231!9.28e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.02e-21;3!CL:0002251;1.57e-07;20!CL:0002076;1.60e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.94e-21,3;CL:0002076,4.08e-09,42;CL:0002251,1.55e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.47e-17;1!UBERON:0008814;4.34e-09;2!UBERON:0010056;4.34e-09;2!UBERON:0005795;4.19e-07;10 | |||
|ontology_enrichment_disease=DOID:5093!2.48e-10!4;DOID:1612!2.48e-10!4;DOID:305!5.58e-09!106;DOID:0050687!2.16e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.43e-16;1!DOID:3149;2.43e-16;1!DOID:3451;7.79e-09;2!DOID:4159;7.79e-09;2!DOID:0060122;7.79e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.25e-16,1;DOID:3149,2.25e-16,1;DOID:3451,7.49e-09,2;DOID:4159,7.49e-09,2;DOID:0060122,7.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.45e-14!3;UBERON:0000920!3.45e-14!3;UBERON:0003124!1.23e-10!7;UBERON:0005631!7.22e-08!14;UBERON:0000158!7.22e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.02e-21;3!UBERON:0000920;4.02e-21;3!UBERON:0003343;2.35e-16;4!UBERON:0004785;2.35e-16;4!UBERON:0000974;3.14e-11;6!UBERON:0000344;1.57e-07;20!UBERON:0005631;5.43e-07;10!UBERON:0000158;5.43e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.94e-21,3;UBERON:0003124,3.44e-20,7;UBERON:0003343,2.26e-16,4;UBERON:0004785,2.26e-16,4;UBERON:0005631,2.03e-10,14;UBERON:0000158,2.03e-10,14;UBERON:0004923,4.02e-08,66;UBERON:0000344,1.55e-07,20;UBERON:0000995,3.42e-07,21;UBERON:0000974,4.26e-07,10;UBERON:0000161,4.79e-07,36;UBERON:0005795,6.89e-07,22;UBERON:0003975,6.89e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3345112812494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4499618862225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,2.92789862985067,0,0,0,0,0.54323685961004,2.23300811812344,0.457987967009312,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.782205530939212,0,0,0.799238438328521,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75142897782519,4.27444964756251,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,6.56397539203527,0,0,0,0,0,0,1.80534113556182,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,2.7492824225286,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434523000071005,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000421737 | |||
}} |
Revision as of 13:27, 22 January 2014
Short description: | p1@ENST00000421737 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000421737_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000421737_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.94e-21 | 3 |
endo-epithelial cell | 4.08e-09 | 42 |
epithelial cell of alimentary canal | 1.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.94e-21 | 3 |
chorion | 3.44e-20 | 7 |
mucosa of oral region | 2.26e-16 | 4 |
respiratory system mucosa | 2.26e-16 | 4 |
extraembryonic membrane | 2.03e-10 | 14 |
membranous layer | 2.03e-10 | 14 |
organ component layer | 4.02e-08 | 66 |
mucosa | 1.55e-07 | 20 |
uterus | 3.42e-07 | 21 |
neck | 4.26e-07 | 10 |
orifice | 4.79e-07 | 36 |
embryonic uterus | 6.89e-07 | 22 |
internal female genitalia | 6.89e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.25e-16 | 1 |
keratoacanthoma | 2.25e-16 | 1 |
skin carcinoma | 7.49e-09 | 2 |
skin cancer | 7.49e-09 | 2 |
integumentary system cancer | 7.49e-09 | 2 |