FFCP PHASE1:Hg19::chr7:5436919..5436930,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:5436919..5436930,- | |||
|id=chr7:5436919..5436930,- | |||
|ontology_enrichment_celltype=CL:0000066!7.06e-12!254;CL:0000063!7.98e-11!578;CL:0000076!1.38e-09!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.92e-08;42!CL:0002368;2.87e-07;13!CL:0000082;7.93e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.42e-15,253;CL:0002076,4.90e-10,42;CL:0000223,1.66e-09,58;CL:0000076,2.11e-09,63;CL:0002368,6.01e-07,13;CL:0000542,7.04e-07,53;CL:0000051,7.04e-07,53;CL:0000082,8.14e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.73e-24!239;DOID:162!9.97e-23!235;DOID:0050686!2.58e-12!137;DOID:305!2.59e-11!106;DOID:0050687!2.73e-10!143;DOID:2531!1.19e-09!51;DOID:0060083!1.19e-09!51;DOID:1749!8.40e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.44e-14;14!DOID:170;1.27e-07;6!DOID:0060058;2.41e-07;10!DOID:0050615;2.60e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.71e-24,239;DOID:162,1.00e-22,235;DOID:305,1.18e-17,106;DOID:0050687,4.27e-16,143;DOID:1749,3.40e-14,14;DOID:0050686,2.14e-11,137;DOID:170,1.00e-07,6;DOID:0050615,1.89e-07,16;DOID:0060058,3.58e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.74e-09!169;UBERON:0000925!1.74e-09!169;UBERON:0006595!1.74e-09!169;UBERON:0001041!4.71e-08!98;UBERON:0001004!8.31e-08!72;UBERON:0000077!2.25e-07!130;UBERON:0001007!4.23e-07!155;UBERON:0001555!4.23e-07!155;UBERON:0007026!4.23e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002075;3.42e-10;18!UBERON:0004807;3.21e-09;22!UBERON:0001264;1.96e-08;10!UBERON:0005911;5.68e-08;36!UBERON:0004802;7.93e-07;19!UBERON:0000115;7.93e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002075,7.60e-10,18;UBERON:0001264,2.12e-08,10;UBERON:0004802,8.14e-07,19;UBERON:0000115,8.14e-07,19 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.903106483949403,1.41679406364623,0.393364276848904,0.383829398097213,0.154816123316076,0.919421224478927,2.10844143144775,1.10926203050036,2.16908161624845,1.42169232487422,0.587200878669695,0,1.00272223735071,0.651032612147555,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0.309706370895104,0.575384784644301,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0.800791974072025,1.14950487990897,1.32208974556972,0,0.569212969109448,0,1.14681968437569,0,1.12101712596307,0.526768169550154,0.590129310341499,0,1.64481199199607,0.668745981562712,0,0.473447805734733,0,0.779873198196215,0,0.886135578334485,1.35401931882508,0.512365278902701,0.780356085359269,0.493313713811028,0.276350017785848,0.869409257205157,0.14828656316206,0.535081656179426,0,0.679856056185397,0.383220493601921,0.34362744548263,0,0,0,0,0.752875595388864,1.02389288923535,0,0.473554504088034,0,0.80642697289893,1.33720097891754,1.15859523106239,0,0,0,0,0,0.724232594804119,0,0,0,0,0,0,3.27865759463288,1.85392221392215,0,0,0.398873881556595,0.476981248610684,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,1.04142150482278,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,1.3082821564276,0,0.12663051166458,0.926864265692532,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.597794722207204,0,0.161872944368132,0,0.61246251376468,0,0.826606249406124,0,0,0,0.718618141816238,0,0,0.554128230968366,0.438977620880838,0,0.150238058906597,0,0.717558542755448,0,0.635795703478686,0.900273288253207,0.412210116953756,0.772921620136887,0.744467425326359,0.337552664482532,0.389748020644795,0.252433774244115,0.368199594569197,0,0,0,0.169560592310488,1.15956511897978,1.63647672354501,2.00763216772303,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,1.77460200059766,0.674338760312407,0.241011029883482,0.661763836394364,0.217879444092406,0.237270619111097,0.134831308160164,0.98110732562673,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0,0.441463099414651,0,0,2.19500570817251,3.37205259772859,0.402115889646523,0.648119116109707,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0.447792613514241,2.03443756959773,0.383382679165211,0,1.49682337822484,1.03664057770386,0.288239906833923,0.50496973370552,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,3.57656445851882,0,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,1.08524321078289,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0.502257091432126,0,0,0,1.42636905040718,0.434343920002738,0.205476322550383,0.358121926479791,0.896681151948218,2.1673383622212,0.862510299438069,1.02674429023799,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.819989904948992,0,0,0,0,0,0.347534457872331,0,0,0.206768026122887,1.07857100409308,1.17400313583789,0,1.66435439510497,0,1.48864684691266,0.460385919864187,0.280660094433074,0.768834895534206,0,1.44768529029247,0,0.154209693802656,0.532685175939381,0.328508624055237,1.03850885836724,0.464841513839837,0,1.60405176242628,1.01289087829486,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0,0,0.103041011647722,0,0,2.29706215198469,3.25030123018261,0,0,0,0,0,0.107420244868274,0,0,0,0.826424576804891,2.11409074101617,2.04180339991335,1.92199783625545,0,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0,0,0.404364963146632,0,0,0.48763373908959,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,2.11688647996127,2.01090682660736,1.08890984861323,0.470719003883896,2.58303223602738,1.68471475667626,1.33029046061003,0.918893600827838,0,0,0,0.476463550915578,0.822724546172388,0,0,0,0,0,3.67560323971548,1.30062222588003,1.00988449083511,1.42283686696828,0.478278818186467,0.798317485731266,0,0.423347165447766,0,0.561594356226918,1.14117339516596,0.626719583092093,0,0.677167111206413,1.605880751037,1.41259795033733,1.27753871307098,0,0.614481528616916,0.671028323677248,0.667396566847634,0.976940477010201,0.835218521685727,1.23087398947712,0.811367035427949,0.99921590399346,2.81974010175699,1.68426486367398,0.293016358543788,0,1.11443384277478,0,0,0,0,0,0.140669416410513,0.333926115068718,1.15362711958732,0,0,0.828851746593443,0,0,1.6001024709939,0,2.42644548097782,1.9692329214317,1.02314474045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| |||
|short_description=p@chr7:5436919..5436930,- | |||
}} |
Revision as of 15:32, 22 January 2014
Short description: | p@chr7:5436919..5436930, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:5436919..5436930, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.42e-15 | 253 |
endo-epithelial cell | 4.90e-10 | 42 |
endodermal cell | 1.66e-09 | 58 |
squamous epithelial cell | 2.11e-09 | 63 |
respiratory epithelial cell | 6.01e-07 | 13 |
lymphocyte | 7.04e-07 | 53 |
common lymphoid progenitor | 7.04e-07 | 53 |
epithelial cell of lung | 8.14e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
viscus | 7.60e-10 | 18 |
pancreas | 2.12e-08 | 10 |
respiratory tract epithelium | 8.14e-07 | 19 |
lung epithelium | 8.14e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.71e-24 | 239 |
cancer | 1.00e-22 | 235 |
carcinoma | 1.18e-17 | 106 |
cell type cancer | 4.27e-16 | 143 |
squamous cell carcinoma | 3.40e-14 | 14 |
organ system cancer | 2.14e-11 | 137 |
endocrine gland cancer | 1.00e-07 | 6 |
respiratory system cancer | 1.89e-07 | 16 |
lymphoma | 3.58e-07 | 10 |