FFCP PHASE1:Hg19::chr7:18834859..18834879,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr7:18834859..18834879,- | |||
|id=chr7:18834859..18834879,- | |||
|ontology_enrichment_celltype=CL:0002591!1.98e-10!1;CL:0000540!7.47e-07!6;CL:0000031!7.47e-07!6;CL:0000404!7.47e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002591;3.34e-66;1!CL:0000333;1.40e-14;5!CL:0000540;2.59e-12;6!CL:0000404;2.59e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.66e-66,1;CL:0000540,2.45e-12,6;CL:0000031,2.45e-12,6;CL:0000404,2.45e-12,6;CL:0000047,1.35e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.59e-12;6 | |||
|ontology_enrichment_disease=DOID:171!1.96e-08!10;DOID:169!8.64e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.19e-12,6;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001954!1.10e-18!2;UBERON:0003022!1.10e-18!2;UBERON:0002421!1.10e-18!2;UBERON:0002600!1.10e-18!2;UBERON:0004145!5.51e-13!3;UBERON:0002134!2.59e-10!1;UBERON:0005208!2.59e-10!1;UBERON:0005946!2.59e-10!1;UBERON:0005965!2.59e-10!1;UBERON:0002078!2.59e-10!1;UBERON:0001736!2.84e-10!1;UBERON:0006298!2.84e-10!1;UBERON:0000349!5.12e-08!5;UBERON:0000013!5.49e-08!5;UBERON:0002410!5.49e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;5.96e-34;2!UBERON:0002012;5.96e-34;2!UBERON:0008886;5.96e-34;2!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0000010;1.04e-08;8!UBERON:0010313;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,7.05e-34,2;UBERON:0007497,7.05e-34,2;UBERON:0003643,7.05e-34,2;UBERON:0003504,7.05e-34,2;UBERON:0003469,7.05e-34,2;UBERON:0003496,7.05e-34,2;UBERON:0002012,7.05e-34,2;UBERON:0008886,7.05e-34,2;UBERON:0007303,7.05e-34,2;UBERON:0002061,7.05e-34,2;UBERON:0005432,7.05e-34,2;UBERON:0004363,7.05e-34,2;UBERON:0004145,4.09e-23,3;UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0003498,1.83e-14,5;UBERON:0005985,1.83e-14,5;UBERON:0010188,2.74e-12,6;UBERON:0002539,2.74e-12,6;UBERON:0003351,2.74e-12,6;UBERON:0008816,2.74e-12,6;UBERON:0000010,1.04e-08,8;UBERON:0000485,1.21e-08,9;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,3.83683113910955,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:18834859..18834879,- | |||
}} |
Revision as of 15:52, 22 January 2014
Short description: | p@chr7:18834859..18834879, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:18834859..18834879, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.66e-66 | 1 |
neuron | 2.45e-12 | 6 |
neuroblast | 2.45e-12 | 6 |
electrically signaling cell | 2.45e-12 | 6 |
neuronal stem cell | 1.35e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 7.05e-34 | 2 |
developing epithelial placode | 7.05e-34 | 2 |
respiratory system arterial blood vessel | 7.05e-34 | 2 |
respiratory system blood vessel | 7.05e-34 | 2 |
respiratory system artery | 7.05e-34 | 2 |
head blood vessel | 7.05e-34 | 2 |
pulmonary artery | 7.05e-34 | 2 |
pulmonary vascular system | 7.05e-34 | 2 |
pharyngeal vasculature | 7.05e-34 | 2 |
truncus arteriosus | 7.05e-34 | 2 |
aortic sac | 7.05e-34 | 2 |
pharyngeal arch artery | 7.05e-34 | 2 |
outflow tract | 4.09e-23 | 3 |
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
heart blood vessel | 1.83e-14 | 5 |
coronary vessel | 1.83e-14 | 5 |
protuberance | 2.74e-12 | 6 |
pharyngeal arch | 2.74e-12 | 6 |
pharyngeal epithelium | 2.74e-12 | 6 |
embryonic head | 2.74e-12 | 6 |
peripheral nervous system | 1.04e-08 | 8 |
simple columnar epithelium | 1.21e-08 | 9 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |