FFCP PHASE1:Hg19::chr7:104444538..104444574,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645591 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000416376,ENST00000434579,NR_034141,NR_034142_5end | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_1_at_LOC645591_5end | |||
|id=chr7:104444538..104444574,- | |||
|ontology_enrichment_celltype=CL:0000148!2.22e-87!10;CL:0000541!2.22e-87!10;CL:0000147!1.95e-62!14;CL:0002567!6.50e-54!3;CL:0000710!1.05e-43!20;CL:0000075!2.36e-32!27;CL:0002077!1.90e-26!33;CL:0000325!2.36e-22!39;CL:0000333!2.96e-20!41;CL:0002566!1.08e-19!1;CL:0000133!3.32e-14!59;CL:0000221!8.07e-12!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.84e-106;10!CL:0000147;5.27e-76;14!CL:0002567;2.79e-65;3!CL:0000710;2.79e-53;20!CL:0000075;1.63e-39;27!CL:0002077;1.15e-27;34!CL:0002566;1.34e-23;1!CL:0000149;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.84e-106,10;CL:0000541,2.84e-106,10;CL:0000147,5.27e-76,14;CL:0002567,2.79e-65,3;CL:0000710,2.79e-53,20;CL:0000075,1.63e-39,27;CL:0002077,2.09e-31,34;CL:0000333,7.57e-25,41;CL:0002566,1.34e-23,1;CL:0000133,1.62e-17,59;CL:0000221,1.99e-14,72;CL:0000149,8.61e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.44e-09;59!CL:0000221;4.77e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!1.89e-37!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.19e-45;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.19e-45,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!5.62e-19!1;UBERON:0009842!5.62e-19!1;UBERON:0003704!5.62e-19!1;UBERON:0001171!5.62e-19!1;UBERON:0001172!5.62e-19!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;6.79e-07;15!UBERON:0007376;6.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,6.79e-07,15;UBERON:0007376,6.79e-07,15;UBERON:0007383,6.79e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.3085026305125,8.40374536228211,3.51652341630141,1.71072446022705,20.976808511478,14.716809834352,64.8826002071413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.3145246729941,390.516576289515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC645591 | |||
}} |
Revision as of 18:34, 22 January 2014
Short description: | p1@LOC645591 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC645591_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | 0bp_to_ENST00000416376, ENST00000434579, NR_034141, NR_034142_5end |
EntrezGene: | LOC645591 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.84e-106 | 10 |
melanoblast | 2.84e-106 | 10 |
pigment cell | 5.27e-76 | 14 |
light melanocyte | 2.79e-65 | 3 |
neurecto-epithelial cell | 2.79e-53 | 20 |
columnar/cuboidal epithelial cell | 1.63e-39 | 27 |
ecto-epithelial cell | 2.09e-31 | 34 |
migratory neural crest cell | 7.57e-25 | 41 |
dark melanocyte | 1.34e-23 | 1 |
neurectodermal cell | 1.62e-17 | 59 |
ectodermal cell | 1.99e-14 | 72 |
visual pigment cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 6.79e-07 | 15 |
outer epithelium | 6.79e-07 | 15 |
enveloping layer of ectoderm | 6.79e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.19e-45 | 2 |