FFCP PHASE1:Hg19::chr8:22422559..22422570,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000522315_5end | |||
|description=CAGE_peak_28_at_SORBS3_5end | |||
|id=chr8:22422559..22422570,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.11e-17!254;CL:0000220!1.64e-07!246;CL:0002321!1.72e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.84e-14;15!CL:0000575;8.45e-13;2!CL:1000497;3.85e-12;17!CL:0002518;3.85e-12;17!CL:1000507;1.24e-09;10!CL:1000494;1.24e-09;10!CL:0002328;4.14e-09;3!CL:0000239;7.99e-09;3!CL:1000615;7.99e-09;3!CL:0002306;7.99e-09;3!CL:0002681;3.39e-08;12!CL:0002584;3.39e-08;12!CL:0002368;1.48e-07;13!CL:0002159;6.61e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,5.67e-14,15;CL:0000575,1.08e-12,2;CL:1000497,2.90e-12,17;CL:0002518,2.90e-12,17;CL:1000507,7.87e-10,10;CL:1000494,7.87e-10,10;CL:0002328,2.96e-09,3;CL:0000239,6.86e-09,3;CL:1000615,6.86e-09,3;CL:0002306,6.86e-09,3;CL:0002681,3.51e-08,12;CL:0002584,3.51e-08,12;CL:0002368,1.35e-07,13;CL:0002159,6.23e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.99e-09;3!UBERON:0008801;3.10e-07;1 | |||
|ontology_enrichment_disease=DOID:305!3.82e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.26e-08!72;UBERON:0004119!3.83e-08!169;UBERON:0000925!3.83e-08!169;UBERON:0006595!3.83e-08!169;UBERON:0000477!4.55e-08!286;UBERON:0003104!6.32e-08!238;UBERON:0009142!6.32e-08!238;UBERON:0004111!1.34e-07!241;UBERON:0006554!2.10e-07!44;UBERON:0001008!4.89e-07!45;UBERON:0000475!5.16e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.84e-14;15!UBERON:0004819;7.84e-14;15!UBERON:0001285;7.84e-14;15!UBERON:0007684;7.84e-14;15!UBERON:0004211;1.24e-09;10!UBERON:0009773;1.24e-09;10!UBERON:0001231;1.24e-09;10!UBERON:0004810;1.24e-09;10!UBERON:0004815;4.14e-09;3!UBERON:0002031;4.14e-09;3!UBERON:0006554;7.02e-09;30!UBERON:0001008;7.02e-09;30!UBERON:0006853;7.99e-09;3!UBERON:0007685;7.99e-09;3!UBERON:0004134;7.99e-09;3!UBERON:0002113;1.96e-08;24!UBERON:0011143;1.96e-08;24!UBERON:0001225;3.39e-08;12!UBERON:0008987;3.39e-08;12!UBERON:0001831;3.10e-07;1!UBERON:0001567;3.10e-07;1!UBERON:0000489;7.00e-07;29!UBERON:0000964;8.07e-07;4!UBERON:0010409;8.07e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,5.67e-14,15;UBERON:0009773,5.67e-14,15;UBERON:0001231,5.67e-14,15;UBERON:0001285,5.67e-14,15;UBERON:0007684,5.67e-14,15;UBERON:0004208,5.67e-14,15;UBERON:0006555,4.59e-13,16;UBERON:0004819,4.59e-13,16;UBERON:0004810,7.87e-10,10;UBERON:0004815,2.96e-09,3;UBERON:0002031,2.96e-09,3;UBERON:0006853,6.86e-09,3;UBERON:0007685,6.86e-09,3;UBERON:0004134,6.86e-09,3;UBERON:0001225,3.51e-08,12;UBERON:0008987,3.51e-08,12;UBERON:0002113,8.08e-08,26;UBERON:0003918,8.08e-08,26;UBERON:0011143,8.08e-08,26;UBERON:0005095,8.08e-08,26;UBERON:0007687,8.08e-08,26;UBERON:0009569,1.55e-07,112;UBERON:0001831,5.50e-07,1;UBERON:0001567,5.50e-07,1;UBERON:0008801,5.50e-07,1;UBERON:0006554,5.52e-07,47;UBERON:0001008,8.15e-07,48;UBERON:0000964,9.11e-07,4;UBERON:0010409,9.11e-07,4;UBERON:0004348,9.11e-07,4;UBERON:0005427,9.11e-07,4 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0.737201809504527,4.88460817580699,0,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,1.50602959389125,2.58827807116751,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0,0,0.175669571386252,0.130979075497713,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0,0,0,0.872188104285069,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0,0,0.468642863667593,0,0,0,0.23486899728753,0,0,0.204154171254893,0,0.309977343527296,0,0,1.82032272387605,0,0,0.375355559615893,0,0.438977620880838,0,0,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0.292311015483596,0.757301322732344,0.0920498986422993,0,0.710019185033229,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.946454400318751,0.842923450390509,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0.539325232640658,0.588664395376038,0,0,0,1.2347220339942,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0.219500570817251,1.1240175325762,0.904760751704678,0.277765335475589,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.567100388969546,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0,0.195801157462741,0,0,0,0,0.606255142892519,0,0,0,0,0.561320188866147,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0,1.01289087829486,0.114814448164607,0.182091168006717,0,0.451199612907412,0.231046011313244,1.56869953835371,1.46139224653261,0,1.13733384070897,0.170093705276516,0.647747748306418,0,0.541892875087706,0.501689773854853,0,1.66215201785745,1.11937377361089,0,0,0,0,0,0.103041011647722,0,0,0,1.95018073810956,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0,0.768760269460425,0,1.2138933702666,0.929691098594572,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.136499911407986,0,0,0,0.66343897524122,1.31535265576129,0.578775534266688,0,0,0.30982349809975,0,0.286822704408103,0.196498082026242,0.35667105148125,0,0,0.329294892959902,0,0.349934720244983,1.25088746543166,0.670302275535787,0,0.188287601553558,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0.539210106883961,0.537063524026827,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0.568967241427498,0.254253650292766,0,0,0,0.173624994933292,0,0,1.52581736317083,1.3269511191747,0.591095237907095,0.219385397153973,0.435753854075961,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0.789168805698781,0,0,0.31593289814244,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.347119476670262,0.391969589657511,0.870592065804026,0.17472666824203,0.171986032471617,0.774050650312681,1.46178634172371,0.246346371159628,0.290967049465258,0,0.225980740780532,0,0,0,0,0.320635281006135,0,0,0,0,0,0.14405479798815,0.372757606696298,0.942776138467182,0.407712618220842,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.393709926058995,0,0,0,0,0.275078873194468,0,0.2249738915515,2.32140586367385,0,0,0,0.314727528809989,0.105600336519406,0.179287339332845,0.575745591958336,0,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0.235265819698172,0,0,0.447764408660622,0,0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| |||
|short_description=p28@SORBS3 | |||
}} |
Revision as of 21:05, 22 January 2014
Short description: | p28@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_SORBS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000522315_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 5.67e-14 | 15 |
corneal epithelial cell | 1.08e-12 | 2 |
kidney cell | 2.90e-12 | 17 |
kidney epithelial cell | 2.90e-12 | 17 |
kidney tubule cell | 7.87e-10 | 10 |
nephron tubule epithelial cell | 7.87e-10 | 10 |
bronchial epithelial cell | 2.96e-09 | 3 |
brush border epithelial cell | 6.86e-09 | 3 |
kidney cortex tubule cell | 6.86e-09 | 3 |
epithelial cell of proximal tubule | 6.86e-09 | 3 |
kidney cortical cell | 3.51e-08 | 12 |
renal cortical epithelial cell | 3.51e-08 | 12 |
respiratory epithelial cell | 1.35e-07 | 13 |
general ecto-epithelial cell | 6.23e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 5.67e-14 | 15 |
renal tubule | 5.67e-14 | 15 |
nephron tubule | 5.67e-14 | 15 |
nephron | 5.67e-14 | 15 |
uriniferous tubule | 5.67e-14 | 15 |
nephrogenic mesenchyme | 5.67e-14 | 15 |
excretory tube | 4.59e-13 | 16 |
kidney epithelium | 4.59e-13 | 16 |
nephron tubule epithelium | 7.87e-10 | 10 |
lower respiratory tract epithelium | 2.96e-09 | 3 |
epithelium of bronchus | 2.96e-09 | 3 |
renal cortex tubule | 6.86e-09 | 3 |
region of nephron tubule | 6.86e-09 | 3 |
proximal tubule | 6.86e-09 | 3 |
cortex of kidney | 3.51e-08 | 12 |
renal parenchyma | 3.51e-08 | 12 |
kidney | 8.08e-08 | 26 |
kidney mesenchyme | 8.08e-08 | 26 |
upper urinary tract | 8.08e-08 | 26 |
kidney rudiment | 8.08e-08 | 26 |
kidney field | 8.08e-08 | 26 |
subdivision of trunk | 1.55e-07 | 112 |
parotid gland | 5.50e-07 | 1 |
cheek | 5.50e-07 | 1 |
parotid gland primordium | 5.50e-07 | 1 |
urinary system structure | 5.52e-07 | 47 |
renal system | 8.15e-07 | 48 |
cornea | 9.11e-07 | 4 |
eye surface | 9.11e-07 | 4 |
optic eminence | 9.11e-07 | 4 |
corneal primordium | 9.11e-07 | 4 |