FFCP PHASE1:Hg19::chr9:116823375..116823380,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=259 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=453 | |||
|TSSclassifier=strong | |||
|UniProt=P78492 | |||
|association_with_transcript=-47bp_to_M11562_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_7_at_AMBP_5end | |||
|id=chr9:116823375..116823380,- | |||
|ontology_enrichment_celltype=CL:0000181!2.59e-53!12;CL:0000417!2.59e-53!12;CL:0000668!2.59e-53!12;CL:0000414!2.59e-53!12;CL:0000412!2.59e-53!12;CL:0000182!2.59e-53!12;CL:0000223!7.97e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.36e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.14e-14,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:7!1.24e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.97e-60!19;UBERON:0006925!8.97e-60!19;UBERON:0008836!8.97e-60!19;UBERON:0008835!1.32e-51!22;UBERON:0003894!1.32e-51!22;UBERON:0009854!2.35e-49!23;UBERON:0007499!2.15e-45!25;UBERON:0009497!2.15e-45!25;UBERON:0000015!2.15e-45!25;UBERON:0002423!2.15e-45!25;UBERON:0006235!2.15e-45!25;UBERON:0004161!2.15e-45!25;UBERON:0005057!1.22e-43!26;UBERON:0009856!1.22e-43!26;UBERON:0002365!1.44e-36!31;UBERON:0002330!1.44e-36!31;UBERON:0002368!2.31e-32!35;UBERON:0000949!4.15e-25!45;UBERON:0003929!7.20e-21!54;UBERON:0005172!1.75e-20!55;UBERON:0005173!1.75e-20!55;UBERON:0002530!4.53e-19!59;UBERON:0002417!1.97e-18!61;UBERON:0000916!1.97e-18!61;UBERON:0005911!1.32e-13!82;UBERON:0001041!2.62e-11!98;UBERON:0005177!2.58e-10!107;UBERON:0009569!9.72e-10!113;UBERON:0002405!1.79e-09!115;UBERON:0003914!2.65e-09!118;UBERON:0000466!1.12e-08!126;UBERON:0000077!2.15e-08!130;UBERON:0004921!2.15e-08!129;UBERON:0004185!2.15e-08!129;UBERON:0000490!7.12e-08!138;UBERON:0005256!1.41e-07!143;UBERON:0001007!6.75e-07!155;UBERON:0001555!6.75e-07!155;UBERON:0007026!6.75e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.48e-19;19!UBERON:0006925;1.48e-19;19!UBERON:0002423;4.40e-15;25!UBERON:0002368;4.50e-12;33!UBERON:0002365;4.53e-12;31!UBERON:0002330;4.53e-12;31!UBERON:0000949;4.38e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.39e-19,19;UBERON:0006925,1.39e-19,19;UBERON:0008836,1.39e-19,19;UBERON:0008835,4.85e-17,22;UBERON:0003894,4.85e-17,22;UBERON:0009854,2.44e-16,23;UBERON:0007499,4.19e-15,25;UBERON:0009497,4.19e-15,25;UBERON:0000015,4.19e-15,25;UBERON:0002423,4.19e-15,25;UBERON:0006235,4.19e-15,25;UBERON:0004161,4.19e-15,25;UBERON:0009856,1.48e-14,26;UBERON:0002365,2.39e-12,31;UBERON:0002330,2.39e-12,31;UBERON:0002368,4.95e-11,35;UBERON:0000949,9.36e-09,45;UBERON:0003929,2.03e-07,54;UBERON:0005172,2.03e-07,54;UBERON:0005173,2.03e-07,54;UBERON:0002530,7.53e-07,59;UBERON:0002417,9.53e-07,60;UBERON:0000916,9.53e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@AMBP | |||
}} |
Revision as of 02:54, 23 January 2014
Short description: | p7@AMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AMBP_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -47bp_to_M11562_5end |
EntrezGene: | AMBP |
HGNC: | 453 |
UniProt: | P78492 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.14e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.39e-19 | 19 |
digestive gland | 1.39e-19 | 19 |
liver bud | 1.39e-19 | 19 |
hepatic diverticulum | 4.85e-17 | 22 |
liver primordium | 4.85e-17 | 22 |
digestive tract diverticulum | 2.44e-16 | 23 |
epithelial sac | 4.19e-15 | 25 |
epithelium of foregut-midgut junction | 4.19e-15 | 25 |
anatomical boundary | 4.19e-15 | 25 |
hepatobiliary system | 4.19e-15 | 25 |
foregut-midgut junction | 4.19e-15 | 25 |
septum transversum | 4.19e-15 | 25 |
sac | 1.48e-14 | 26 |
exocrine gland | 2.39e-12 | 31 |
exocrine system | 2.39e-12 | 31 |
endocrine gland | 4.95e-11 | 35 |
endocrine system | 9.36e-09 | 45 |
gut epithelium | 2.03e-07 | 54 |
abdomen element | 2.03e-07 | 54 |
abdominal segment element | 2.03e-07 | 54 |
gland | 7.53e-07 | 59 |
abdominal segment of trunk | 9.53e-07 | 60 |
abdomen | 9.53e-07 | 60 |