DOID:5409: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id= | ||
|comment=OMIM mapping confirmed by DO. [SN]. | |comment=OMIM mapping confirmed by DO. [SN]. | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:5409 | |||
|is_a=DOID:3905 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lung small cell carcinoma | |||
|namespace=disease_ontology | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym="Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006];;"SCLC" EXACT [CSP2005:2017-6589];;"small cell carcinoma of lung" RELATED [];;"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001];;"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
|union_of= | |||
|xref=MSH:D055752;;NCI:C4917;;OMIM:182280;;SNOMEDCT_2010_1_31:254632001;;SNOMEDCT_2010_1_31:254633006;;UMLS_CUI:C0149925 | |||
}} | }} | ||
Revision as of 10:36, 12 September 2014
| Name: | lung small cell carcinoma | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Xrefs: |
| ||
| Synonyms: |
"Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006] "SCLC" EXACT [CSP2005:2017-6589] "small cell carcinoma of lung" RELATED [] "small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001] "small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
| Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3905(lung carcinoma) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
... further results Mouse (Mus musculus)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:6324309..6324314,-#_5be4114e7d0131f457d60e83d77a108d | p43@PPP2R2C |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626580..97626585,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626580..97626585, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:222160741..222160750,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:222160741..222160750, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:73967160..73967162,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:73967160..73967162, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:76549637..76549662,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76549637..76549662, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:154858693..154858698,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154858693..154858698, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:97965705..97965721,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97965705..97965721, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr19:46763326..46763349,+#_5be4114e7d0131f457d60e83d77a108d | p@chr19:46763326..46763349, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:129513919..129513922,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:129513919..129513922, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:10085799..10085809,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:10085799..10085809, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:48394285..48394295,+#_5be4114e7d0131f457d60e83d77a108d | p@chrX:48394285..48394295, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:60194446..60194457,-#_5be4114e7d0131f457d60e83d77a108d | p16@RTN1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:79097476..79097484,+#_5be4114e7d0131f457d60e83d77a108d | p@chr5:79097476..79097484, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chrX:135761770..135761786,-#_5be4114e7d0131f457d60e83d77a108d | p@chrX:135761770..135761786, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:199134722..199134729,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:199134722..199134729, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:21209872..21209910,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:21209872..21209910, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:241625540..241625541,+#_5be4114e7d0131f457d60e83d77a108d | p14@ENST00000407635 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:17454062..17454088,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:17454062..17454088, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:111234799..111234807,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:111234799..111234807, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:185426203..185426209,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:185426203..185426209, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:84664700..84664710,+#_5be4114e7d0131f457d60e83d77a108d | p1@ENST00000547882 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:86703174..86703181,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86703174..86703181, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:220594730..220594748,+#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000442416 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:100110851..100110860,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:100110851..100110860, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:46124855..46124858, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:51255348..51255351,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:51255348..51255351, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:76755731..76755739,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76755731..76755739, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:60194318..60194325,-#_5be4114e7d0131f457d60e83d77a108d | p22@RTN1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:20538015..20538023,-#_5be4114e7d0131f457d60e83d77a108d | p@chr11:20538015..20538023, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:70939741..70939790,-#_5be4114e7d0131f457d60e83d77a108d | p@chr17:70939741..70939790, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98080543..98080550,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98080543..98080550, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:66088105..66088108,-#_5be4114e7d0131f457d60e83d77a108d | p@chr16:66088105..66088108, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:115999570..115999575,+#_5be4114e7d0131f457d60e83d77a108d | p9@VWA2 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:39140424..39140431,-#_5be4114e7d0131f457d60e83d77a108d | p4@KRT40 |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:154251771..154251775,-#_5be4114e7d0131f457d60e83d77a108d | p@chrX:154251771..154251775, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:26590563..26590574,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26590563..26590574, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:20538015..20538023,-#_5be4114e7d0131f457d60e83d77a108d | p@chr11:20538015..20538023, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chrX:10852011..10852021,-#_5be4114e7d0131f457d60e83d77a108d | p27@MID1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:41186960..41186982,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:41186960..41186982, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:208001650..208001675,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:208001650..208001675, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:130564567..130564572,-#_5be4114e7d0131f457d60e83d77a108d | p2@LOC100131048 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:154858754..154858762,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154858754..154858762, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:37331745..37331763,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:37331745..37331763, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:134915254..134915270,-#_5be4114e7d0131f457d60e83d77a108d | p3@CXCL14 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:39018314..39018323,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:39018314..39018323, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:115999570..115999575,+#_5be4114e7d0131f457d60e83d77a108d | p9@VWA2 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:95426545..95426559,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:95426545..95426559, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626065..97626084,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626065..97626084, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:17457123..17457129,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:17457123..17457129, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:73794113..73794122,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:73794113..73794122, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:134920622..134920655,+#_5be4114e7d0131f457d60e83d77a108d | p@chr5:134920622..134920655, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:95775942..95775990,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:95775942..95775990, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:28571958..28571968,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:28571958..28571968, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:102635409..102635414,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:102635409..102635414, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:1643561..1643566,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:1643561..1643566, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:81686906..81686911,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:81686906..81686911, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98103977..98103981,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98103977..98103981, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:103235035..103235044,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235035..103235044, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:45398505..45398508,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:45398505..45398508, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:58979826..58979836,+#_5be4114e7d0131f457d60e83d77a108d | p@chr17:58979826..58979836, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:13010455..13010466,+#_5be4114e7d0131f457d60e83d77a108d | p@chr16:13010455..13010466, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:89802926..89802934,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:89802926..89802934, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:134907210..134907215,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:134907210..134907215, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:150914241..150914244,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:150914241..150914244, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:225650299..225650317,-#_5be4114e7d0131f457d60e83d77a108d | p@chr1:225650299..225650317, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:26590581..26590596,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26590581..26590596, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:13085064..13085070,+#_5be4114e7d0131f457d60e83d77a108d | p@chr20:13085064..13085070, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:25269076..25269105,-#_5be4114e7d0131f457d60e83d77a108d | p@chr13:25269076..25269105, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:54535470..54535475,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:54535470..54535475, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:10085817..10085825,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:10085817..10085825, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:79840127..79840130,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79840127..79840130, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr15:89655929..89655934,+#_5be4114e7d0131f457d60e83d77a108d | p@chr15:89655929..89655934, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:1643561..1643566,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:1643561..1643566, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:58979826..58979836,+#_5be4114e7d0131f457d60e83d77a108d | p@chr17:58979826..58979836, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98015616..98015617,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98015616..98015617, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:92571252..92571265,-#_5be4114e7d0131f457d60e83d77a108d | p@chr13:92571252..92571265, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:129703430..129703445,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129703430..129703445, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:37420947..37420953,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:37420947..37420953, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:3344577..3344588,+#_5be4114e7d0131f457d60e83d77a108d | p@chr4:3344577..3344588, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:7411388..7411391,+#_5be4114e7d0131f457d60e83d77a108d | p@chr16:7411388..7411391, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:76755731..76755739,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76755731..76755739, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:129703430..129703445,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129703430..129703445, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:192805223..192805230,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:192805223..192805230, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98015654..98015697,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98015654..98015697, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:116215298..116215305,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:116215298..116215305, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:44574327..44574332,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:44574327..44574332, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:95776211..95776254,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:95776211..95776254, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:28571974..28571978,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:28571974..28571978, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:102635473..102635480,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:102635473..102635480, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:120381610..120381618,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:120381610..120381618, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:135120480..135120481,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:135120480..135120481, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:194837773..194837784,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:194837773..194837784, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:103235120..103235130,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235120..103235130, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:97961177..97961185,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97961177..97961185, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:50553120..50553126,-#_5be4114e7d0131f457d60e83d77a108d | p@chr16:50553120..50553126, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626442..97626445, - |
