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{{UBERON
{{UBERON
|id=UBERON:0001434
|alt_id=UBERON:FMA_23875-FMA_23881-MA_0000018-MIAA_0000032-XAO_0003060-ZFA_0000434
|name=skeletal system
|anatomical_img_id=FMA:23875
|namespace=
|def="Organ system subdivision which consists of the skeleton and the articular system.[FMA]" [AAO:0000566, FMA:FMA, Wikipedia:Skeleton]
|xref=AAO:0000566;;BTO:0001486;;EFO:0000806;;EHDAA2:0003168;;EV:0100139;;FMA:23881;;MA:0000018;;MESH:A.02;;ncithesaurus:Skeletal_System;;OpenCyc:Mx4rvVi1rpwpEbGdrcN5Y29ycA;;TAO:0000434;;VAO:0000027;;VHOG:0001254;;XAO:0003060;;ZFA:0000434
|is_a=UBERON:0000467;;UBERON:0004120
|synonym="set of all bones and joints" NARROW SENSU [];;"skeleton system" EXACT [];;"Skelettsystem" RELATED [BTO:0001486]
|comment=Note that GO defines skeletal system very generically: The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) GO:0001501; however, all annotations are to vertebrates
|comment=Note that GO defines skeletal system very generically: The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) GO:0001501; however, all annotations are to vertebrates
|alt_id=UBERON:FMA_23875-FMA_23881-MA_0000018-MIAA_0000032-XAO_0003060-ZFA_0000434
|disjoint_from=UBERON:0001474;;UBERON:0002204;;UBERON:0002294;;UBERON:0002330;;UBERON:0002390;;UBERON:0002405;;UBERON:0002416;;UBERON:0002423;;UBERON:0004456
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Organ system subdivision which consists of the skeleton and the articular system.[FMA]" [AAO:0000566, FMA:FMA]
|subset=uberon_slim;;vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=UBERON:0001474;;UBERON:0002204;;UBERON:0002294;;UBERON:0002330;;UBERON:0002390;;UBERON:0002405;;UBERON:0002416;;UBERON:0002423;;UBERON:0004456
|has_quality=
|has_quality=
|id=UBERON:0001434
|is_a=UBERON:0000467
|is_obsolete=
|located_in=
|located_in=
|name=skeletal system
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002204
|part_of=UBERON:0002204
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;"spatially_disjoint_from" UBERON:0001016;;UBPROP:0000001 "Anatomical system consisting of multiple elements and tissues that provides physical support.[TAO]" xsd:string;;UBPROP:0000001 "Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system.[VSAO]" xsd:string;;UBPROP:0000001 "System that provides physical support to the organism.[AAO]" xsd:string
|subset=uberon_slim;;vertebrate_core
|synonym="set of all bones and joints" NARROW SENSU [];;"skeleton system" EXACT [];;"Skelettsystem" RELATED [BTO:0001486]
|union_of=
|xref=AAO:0000566;;BTO:0001486;;EFO:0000806;;EHDAA2:0003168;;FMA:23881;;MA:0000018;;ncithesaurus:Skeletal_System;;OpenCyc:Mx4rvVi1rpwpEbGdrcN5Y29ycA;;TAO:0000434;;VHOG:0001254;;VSAO:0000027;;XAO:0003060;;ZFA:0000434
}}
}}

Latest revision as of 17:18, 12 September 2014

Name:skeletal system
Namespace:FANTOM
Definition:"Organ system subdivision which consists of the skeleton and the articular system.[FMA]" [AAO:0000566, FMA:FMA]
Xrefs:
links:

AAO:0000566
BTO:0001486
EFO:0000806
EHDAA2:0003168
FMA:23881
MA:0000018
ncithesaurus:Skeletal_System
OpenCyc:Mx4rvVi1rpwpEbGdrcN5Y29ycA
TAO:0000434
VHOG:0001254
VSAO:0000027
XAO:0003060

ZFA:0000434
Synonyms: "set of all bones and joints" NARROW SENSU []
"skeleton system" EXACT []
"Skelettsystem" RELATED [BTO:0001486]
Comments:Note that GO defines skeletal system very generically: The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) GO:0001501; however, all annotations are to vertebrates
Alt_id: UBERON:FMA_23875-FMA_23881-MA_0000018-MIAA_0000032-XAO_0003060-ZFA_0000434
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000467(anatomical system)
disjoint_from:UBERON:0001474(bone element),UBERON:0002204(musculoskeletal system),UBERON:0002294(biliary system),UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)
part_of:UBERON:0002204(musculoskeletal system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system)
part of:UBERON:0000075 (subdivision of skeletal system),UBERON:0001474 (bone element),UBERON:0004288 (skeleton),UBERON:0004765 (skeletal element),UBERON:0004770 (articular system),UBERON:0008846 (skeletal ligament)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001434 (skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system consisting of multiple elements and tissues that provides physical support.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "System that provides physical support to the organism.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.