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UBERON:0002079: Difference between revisions

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|is_obsolete=
|is_obsolete=
|located_in=
|located_in=
|name=left atrium
|name=left cardiac atrium
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 17:25, 12 September 2014

Name:left cardiac atrium
Namespace:FANTOM
Definition:"Left cardiac chamber which is continuous with the pulmonary venous trunk.[FMA]" [FMA:FMA, Wikipedia:Left_atrium]
Xrefs:
links:

AAO:0010247
BTO:0001702
EHDAA2:0000275
EMAPA:17315
FMA:7097
galen:LeftAtrium
[1]
[ 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png]
MA:0000074
ncithesaurus:Left_Atrium
OpenCyc:Mx4rkJN1AagEEdudWQACs5b6Bw
OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rDJ89oqgPEdudWQACs5b6Bw
SCTID:244387002
VHOG:0000369

XAO:0003191
Synonyms: "atrium sinistrum" RELATED LATIN [Wikipedia:Left_atrium]
"cardiac left atrium" EXACT []
"heart left atrium" EXACT []
"left atrium of heart" EXACT []
"left cardiac atrium" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_7097-MA_0000074
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002081(cardiac atrium),UBERON:0015212(lateral structure)



Children

derives from:FF:0010079 (human left atrium - adult sample)
part of:UBERON:0005966 (outflow part of left atrium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002079 (left cardiac atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data