UBERON:0002079: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 12: | Line 12: | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=left atrium | |name=left cardiac atrium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 17:25, 12 September 2014
Name: | left cardiac atrium | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "Left cardiac chamber which is continuous with the pulmonary venous trunk.[FMA]" [FMA:FMA, Wikipedia:Left_atrium] | ||
Xrefs: |
| ||
Synonyms: |
"atrium sinistrum" RELATED LATIN [Wikipedia:Left_atrium] "cardiac left atrium" EXACT [] "heart left atrium" EXACT [] "left atrium of heart" EXACT [] "left cardiac atrium" EXACT [] | ||
Comments: | This class was created automatically from a combination of ontologies | ||
Alt_id: | UBERON:FMA_7097-MA_0000074 | ||
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002081(cardiac atrium),UBERON:0015212(lateral structure) |
---|
Children
derives from: | FF:0010079 (human left atrium - adult sample) |
---|---|
part of: | UBERON:0005966 (outflow part of left atrium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10079-102A7 (left atrium, adult, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002079 (left cardiac atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data