UBERON:0004819: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0004819
|name=kidney epithelium
|namespace=
|def="An epithelium that is part of a kidney [Obol]." [OBOL:automatic]
|xref=BTO:0000059;;MA:0002846
|is_...") |
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="An epithelium that is part of a kidney [Obol]." [OBOL:automatic] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004819 | |||
|is_a=UBERON:0000483 ;;UBERON:0006554 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=kidney epithelium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002113 | |part_of=UBERON:0002113 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym="epithelial tissue of kidney" EXACT [OBOL:automatic];;"epithelium of kidney" EXACT [OBOL:automatic];;"kidney epithelial tissue" EXACT [OBOL:automatic] | |||
|union_of= | |||
|xref=BTO:0000059;;MA:0002846 | |||
}} | }} | ||
Latest revision as of 17:48, 12 September 2014
| Name: | kidney epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelium that is part of a kidney [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"epithelial tissue of kidney" EXACT [OBOL:automatic] "epithelium of kidney" EXACT [OBOL:automatic] "kidney epithelial tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000483(epithelium),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| is a: | UBERON:0004211 (nephron epithelium),UBERON:0005103 (mesonephric epithelium),UBERON:0007684 (uriniferous tubule),UBERON:0009201 (nephric duct),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11597-120H4 (Renal Epithelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004819 (kidney epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2c | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2c | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4 | p4@PAX2 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4 | p4@PAX2 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0c | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0c | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr7:56772735..56772741, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr3:103650758..103650778, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379306..21379315, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21380670..21380678, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p1@9230113P08Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr7:148445639..148445665, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141482..19141496,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:19141482..19141496, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr15:75329148..75329155, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr16:25752228..25752237, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90368977..90368987,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:90368977..90368987, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:25706249..25706254, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:6204391..6204398,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@Gm6792 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:101958887..101958896, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@Defb23 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:74784728..74784738,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr18:74784728..74784738, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr14:51680551..51680555, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379118..21379120,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379118..21379120, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379261..21379264, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p4@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35252614..35252635,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p3@Ly6g5b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:101959282..101959299, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:65253465..65253475,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr3:65253465..65253475, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:90155722..90155743, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:22547027..22547063,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr16:22547027..22547063, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p7@Spink10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr2:25677632..25677636, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:155698166..155698174, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:50280181..50280192, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651764..35651782,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr2:164434346..164434353, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:59845376..59845393,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280199..50280211,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:50280199..50280211, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379065..21379072,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379065..21379072, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:104945515..104945524,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr12:104945515..104945524, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:61976287..61976297,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr10:61976287..61976297, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p15@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87936213..87936218,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:87936213..87936218, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:87936238..87936249, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496286..130496293,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:130496286..130496293, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:73221062..73221084,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr17:73221062..73221084, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p4@Atp4a |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:23045782..23045791, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:24865194..24865204,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr17:24865194..24865204, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr4:33600466..33600491, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:62816857..62816866,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p7@Spink10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798132..75798152,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:75798132..75798152, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:31379454..31379466, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr15:75304916..75304925, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:134893699..134893708,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr4:134893699..134893708, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21385325..21385329, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25348986..25348999,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p4@Lcn12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:24270118..24270122, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:69116075..69116107,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr14:69116075..69116107, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:17224952..17224968,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:17224952..17224968, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:110773580..110773589, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51627586..51627595,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p4@Rnase10 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845349..59845371,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:59845349..59845371, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr15:72756032..72756041, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:192816674..192816714, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379372..21379404, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35657485..35657490,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p3@Gm3428 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21383212..21383225, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141371..19141383,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:19141371..19141383, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25349488..25349492,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p6@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p15@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90156002..90156013,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:90156002..90156013, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:23308115..23308126,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr16:23308115..23308126, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155951..90155962,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:90155951..90155962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p3@9230104L09Rik |
