UBERON:0004905: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="anatomical cluster that connects two or more adjacent skeletal elements or hardened body parts." [] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004905 | |||
|is_a=UBERON:0000477 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=articulation | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0004770 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=grouping_class | ||
| | |synonym= | ||
|union_of= | |||
|xref=FBbt:00005811 | |||
}} | }} |
Latest revision as of 17:49, 12 September 2014
Name: | articulation | |
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Namespace: | FANTOM | |
Definition: | "anatomical cluster that connects two or more adjacent skeletal elements or hardened body parts." [] | |
Xrefs: |
| |
Subset: | grouping_class |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000477(anatomical cluster) |
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part_of: | UBERON:0004770(articular system) |
Children
is a: | UBERON:0000982 (skeletal joint) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10267-104D6
- 10295-104G7 (cruciate ligament, donor2)
- 10323-105A8
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11291-117A4 (Synoviocyte, donor1)
- 11368-117I9 (Synoviocyte, donor2)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11440-118H9 (Synoviocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004905 (articulation), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data