FFCP PHASE1:Hg19::chr10:105362701..105362740,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105362701..105362740,- | |||
|description=CAGE_peak_at_chr10:105362701..105362740,- | |description=CAGE_peak_at_chr10:105362701..105362740,- | ||
|id=chr10:105362701..105362740,- | |id=chr10:105362701..105362740,- | ||
|ontology_enrichment_celltype=CL:0002334!2.04e-09!12;CL:0000055!5.41e-09!180 | |ontology_enrichment_celltype=CL:0002334!2.04e-09!12;CL:0000055!5.41e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.60e-24;13!CL:0002334;9.10e-21;12!CL:0002579;5.06e-17;3!CL:0002615;2.62e-16;3!CL:0002521;8.94e-16;3!CL:0002617;2.63e-11;2!CL:0002580;3.17e-08;3 | |ontology_enrichment_celltype_v019=CL:0000136;4.60e-24;13!CL:0002334;9.10e-21;12!CL:0002579;5.06e-17;3!CL:0002615;2.62e-16;3!CL:0002521;8.94e-16;3!CL:0002617;2.63e-11;2!CL:0002580;3.17e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.70e-21,15;CL:0002334,1.21e-20,12;CL:0002579,4.96e-17,3;CL:0002615,1.93e-16,3;CL:0002521,8.99e-16,3;CL:0002617,1.38e-11,2;CL:0002580,2.96e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.36e-08;3!DOID:127;9.36e-08;3 | |ontology_enrichment_disease_v019=DOID:0060084;9.36e-08;3!DOID:127;9.36e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.04e-08,3;DOID:127,7.04e-08,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.54e-31;6!UBERON:0002358;1.54e-31;6!UBERON:0003684;1.54e-31;6!UBERON:0001178;1.54e-31;6!UBERON:0004457;7.23e-28;9!UBERON:0000042;7.23e-28;9!UBERON:0002190;8.94e-16;3!UBERON:0002072;1.15e-09;5!UBERON:0000310;1.20e-08;10!UBERON:0001443;7.30e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.54e-31;6!UBERON:0002358;1.54e-31;6!UBERON:0003684;1.54e-31;6!UBERON:0001178;1.54e-31;6!UBERON:0004457;7.23e-28;9!UBERON:0000042;7.23e-28;9!UBERON:0002190;8.94e-16;3!UBERON:0002072;1.15e-09;5!UBERON:0000310;1.20e-08;10!UBERON:0001443;7.30e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.11e-31,6;UBERON:0002358,1.11e-31,6;UBERON:0003684,1.11e-31,6;UBERON:0001178,1.11e-31,6;UBERON:0004457,7.80e-21,12;UBERON:0000042,7.80e-21,12;UBERON:0002190,8.99e-16,3;UBERON:0002072,1.16e-09,5;UBERON:0004923,7.14e-09,66;UBERON:0000310,9.04e-09,10;UBERON:0001443,5.64e-08,11 | |||
|phase1_expression=1.99846217197612,3.8538094300377,1.9733616573436,2.00146596706261,4.02264984984559,0.872338524100369,2.53299878168311,1.26343974685366,1.56711376919903,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,0,0.869079113764942,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,0.860509862246441,0.354668382198357,0.560677600142307,1.06748995729705,0.49333509683432,0.311211035399766,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0.352303495931295,0.647491777472526,0.140450806702248,0,0,0,2.37600571456411,1.48360157567134,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0,0.635795703478686,0,0.721367704669072,0.257640540045629,0.37223371266318,0,0.974370051611986,0.252433774244115,0.276149695926898,0.646584227275248,0,0.604512589365842,0,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,0,0.473227200159376,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75600456653801,0,0.301586917234893,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0.766765358330422,0,0.088048434013226,0.414656231081544,0.576479813667846,0.6312121671319,0,0.763976851116555,0,0,0.308482478109971,0.600686115687835,0.571652865261156,0.112131084345361,0,0.07333828582095,0.775630294546667,0,0,1.86156681609409,0,0,1.41849132023278,0,0.285955987316295,1.08524321078289,0,0,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,0.892144943985809,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.955719759148911,0.587403472388222,0.343143423810856,0,0,0,0,0,0,4.96215615637554,0.460385919864187,4.77122160536225,4.86928767171664,4.60536524160033,4.82561763430822,1.48418066444991,0.462629081407967,0.710246901252508,0.410635780069046,1.03850885836724,0.348631135379878,0,2.00506470303285,0.368323955743585,0.229628896329213,0.364182336013434,1.57349297951309,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,1.95018073810956,0,0.48335359146061,0.308097234229289,0.614014698904518,0.137836572484531,0,0.725083469571143,0.0852266274161009,1.33548053470106,0.330569830721956,0.384380134730212,0.127612712494584,0.30347334256665,0,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.18532421910392,0,0,0.316379424718726,0,0.767693373934002,0.42793898803392,0,0,0,0.823611089208164,0.235624804691373,0.202182481573316,0,0,0,0.487426979262569,2.11300293513511,0.818999468447914,0.989838023675989,0,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.633322905892992,1.64647446479951,0,0,0.48111056362756,0,0,0.282431402330337,0.86101074534246,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0.20453736500431,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0.219385397153973,0.32681539055697,0.83654246567162,0.615602068030377,0,0,0.0897576444097721,0.108647371922008,0.638002319463839,0.457987967009312,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0,0.450970258243478,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0.146178634172371,0.164230914106418,0.290967049465258,0.0882561266915003,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0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| ||
|short_description=p@chr10:105362701..105362740,- | |short_description=p@chr10:105362701..105362740,- | ||
}} | }} |
Latest revision as of 10:01, 23 July 2015
Short description: | p@chr10:105362701..105362740, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105362701..105362740, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.70e-21 | 15 |
preadipocyte | 1.21e-20 | 12 |
omentum preadipocyte | 4.96e-17 | 3 |
adipocyte of omentum tissue | 1.93e-16 | 3 |
subcutaneous fat cell | 8.99e-16 | 3 |
adipocyte of breast | 1.38e-11 | 2 |
preadipocyte of the breast | 2.96e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.11e-31 | 6 |
peritoneum | 1.11e-31 | 6 |
abdominal cavity | 1.11e-31 | 6 |
visceral peritoneum | 1.11e-31 | 6 |
cavity lining | 7.80e-21 | 12 |
serous membrane | 7.80e-21 | 12 |
subcutaneous adipose tissue | 8.99e-16 | 3 |
hypodermis | 1.16e-09 | 5 |
organ component layer | 7.14e-09 | 66 |
breast | 9.04e-09 | 10 |
chest | 5.64e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.04e-08 | 3 |
leiomyoma | 7.04e-08 | 3 |