FFCP PHASE1:Hg19::chr10:113987378..113987454,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:113987378..113987454,- | |||
|coexpression_cluster_id=C576 | |||
|description=CAGE_peak_at_chr10:113987378..113987454,- | |||
|id=chr10:113987378..113987454,- | |||
|ontology_enrichment_celltype=CL:0000136!5.29e-18!15;CL:0000181!1.93e-08!12;CL:0000417!1.93e-08!12;CL:0000668!1.93e-08!12;CL:0000414!1.93e-08!12;CL:0000412!1.93e-08!12;CL:0000182!1.93e-08!12;CL:0002334!1.98e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.24e-28;13!CL:0000182;3.56e-14;12!CL:0002580;6.26e-09;3!CL:0002521;1.24e-08;3!CL:0002615;1.32e-08;3!CL:0002623;1.72e-08;3!CL:0002334;1.97e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.20e-24,15;CL:0000182,4.26e-14,12;CL:0002580,6.80e-09,3;CL:0002521,1.09e-08,3;CL:0002615,1.35e-08,3;CL:0002623,1.98e-08,3;CL:0002334,1.94e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.16e-15;11!UBERON:0009497;1.85e-12;13!UBERON:0003104;5.77e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.56e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.31e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001013!2.11e-10!14;UBERON:0002365!8.83e-10!31;UBERON:0002330!8.83e-10!31;UBERON:0009854!1.79e-08!23;UBERON:0002107!2.00e-08!19;UBERON:0006925!2.00e-08!19;UBERON:0008836!2.00e-08!19;UBERON:0009497!2.98e-08!25;UBERON:0000015!2.98e-08!25;UBERON:0002423!2.98e-08!25;UBERON:0006235!2.98e-08!25;UBERON:0004161!2.98e-08!25;UBERON:0000475!3.37e-08!365;UBERON:0003688!4.50e-08!6;UBERON:0002358!4.50e-08!6;UBERON:0003684!4.50e-08!6;UBERON:0001178!4.50e-08!6;UBERON:0009856!5.23e-08!26;UBERON:0008835!9.01e-08!22;UBERON:0003894!9.01e-08!22;UBERON:0007499!2.41e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.14e-16;19!UBERON:0006925;9.14e-16;19!UBERON:0002365;1.08e-15;31!UBERON:0002330;1.08e-15;31!UBERON:0002423;2.44e-11;25!UBERON:0003688;4.55e-11;6!UBERON:0002358;4.55e-11;6!UBERON:0003684;4.55e-11;6!UBERON:0001178;4.55e-11;6!UBERON:0000310;1.63e-09;10!UBERON:0002190;1.24e-08;3!UBERON:0001443;1.43e-08;11!UBERON:0002368;2.58e-07;33!UBERON:0004457;3.09e-07;9!UBERON:0000042;3.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.43e-16,31;UBERON:0002330,2.43e-16,31;UBERON:0002107,1.05e-15,19;UBERON:0006925,1.05e-15,19;UBERON:0008836,1.05e-15,19;UBERON:0008835,3.38e-13,22;UBERON:0003894,3.38e-13,22;UBERON:0009854,1.65e-12,23;UBERON:0007499,2.69e-11,25;UBERON:0009497,2.69e-11,25;UBERON:0000015,2.69e-11,25;UBERON:0002423,2.69e-11,25;UBERON:0006235,2.69e-11,25;UBERON:0004161,2.69e-11,25;UBERON:0003688,4.57e-11,6;UBERON:0002358,4.57e-11,6;UBERON:0003684,4.57e-11,6;UBERON:0001178,4.57e-11,6;UBERON:0009856,9.22e-11,26;UBERON:0000310,1.64e-09,10;UBERON:0002417,7.79e-09,60;UBERON:0000916,7.79e-09,60;UBERON:0002190,1.09e-08,3;UBERON:0001443,1.43e-08,11;UBERON:0009569,2.14e-08,112;UBERON:0002530,8.33e-08,59;UBERON:0002368,2.38e-07,35 | |||
|phase1_expression=5.99538651592837,7.70761886007539,6.76581139660662,3.00219895059391,2.68176656656373,0.872338524100369,2.53299878168311,3.79031924056099,7.05201196139564,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.572471974262113,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7245751528176,3.40644409211845,0,0.886917589850256,0.351339142772504,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0,0.974370051611986,0.252433774244115,0.184099797284599,0,0,0.10075209822764,0,0.57978255948989,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,41.8291614912042,83.5403134175982,57.3066209480962,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,3.04498977189684,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,2.28015329005615,0,0,0,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0.868687840005475,1.64381058040307,2.32779252211864,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,1.7571212248907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.17998888929474,5.06424511850606,4.2099014164961,3.33161788064823,0.511707249066704,7.39928037260594,1.48418066444991,0.616838775210622,0.532685175939381,0,0,0,0.362578348774867,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9359248187488,0,0,0,0,0,0,0,0,0.413509717453592,1.07420244868274,0.290033387828457,0.0852266274161009,0,0.826424576804891,0.384380134730212,4.46644493731044,0.4046311234222,1.39453664789186,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7242377957483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1158997199083,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0.16480387422676,0,0.796991953004279,0.828851746593443,0,16.5675265653491,0,0.311039587661807,0,0,0,0.197286811273867,0,0,2.90799823828566,0.0927680981618513,0,0,0,41.3249757997832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24133456896206,0,0,0,0,0.824378340616761,5.33034776018635,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0.995261931078505,0.973033209536731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,10.3331598085555,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.343189995723929,0.14405479798815,0,0,0,0.104602846312333,0.203996435272644,1.73370353940911,1.20084057741958,0,0,0,0,1.39641200636127,2.52076466412852,0,0.199679000498991,0.429226048136571,0.446342914883745,0,1.44119953416961,1.16495949527454,67.1232713257545,71.289717499709,74.4809159588743,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,2.1440859791201,0,0,0,0,0,0,0,1.70388021785422,0,26.672506529411,41.0771355627886,0,0,0,0,1.38823636338003,0,0.414239055347196,0.992332043623902,0,0,0,33.7291038089074,36.6007245273142,31.5535944066365,43.9349325151138,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.895528817321244,0.233713309847224,0,0,0,0,0,0,2.02068360757615,0,0.159296767163702,1.34940933649081,2.32894435314389,0,0,3.1304703708704,1.35231848097497,0,1.22061219961398,1.27294061441792,1.07410557042488,0.928067519756987,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0.381382095467167,1.3807198521202,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0.342976018874837,0,0,0,0,0,0.471346769748006,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,1.24329698497822,5.4629912670064,6.91259661814092,0,0,0.0852134047591577,1.27016115057279,0,0.31020638566432,1.91107787795487,0,0,0,0,0.102662806856247,0,1.94284397223656,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,3.39854229375634,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,0,0,0,0,0.190941474834495,0.202117188958219,0,0.342233301085281,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0,0,4.66029741929859,2.41528552309231,0 | |||
|short_description=p@chr10:113987378..113987454,- | |||
}} |
Latest revision as of 10:29, 23 July 2015
Short description: | p@chr10:113987378..113987454, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:113987378..113987454, - |
Coexpression cluster: | C576_Hepatocyte_hepatocellular_liver_Intestinal_mature_breast_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.20e-24 | 15 |
hepatocyte | 4.26e-14 | 12 |
preadipocyte of the breast | 6.80e-09 | 3 |
subcutaneous fat cell | 1.09e-08 | 3 |
adipocyte of omentum tissue | 1.35e-08 | 3 |
acinar cell of salivary gland | 1.98e-08 | 3 |
preadipocyte | 1.94e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.43e-16 | 31 |
exocrine system | 2.43e-16 | 31 |
liver | 1.05e-15 | 19 |
digestive gland | 1.05e-15 | 19 |
liver bud | 1.05e-15 | 19 |
hepatic diverticulum | 3.38e-13 | 22 |
liver primordium | 3.38e-13 | 22 |
digestive tract diverticulum | 1.65e-12 | 23 |
epithelial sac | 2.69e-11 | 25 |
epithelium of foregut-midgut junction | 2.69e-11 | 25 |
anatomical boundary | 2.69e-11 | 25 |
hepatobiliary system | 2.69e-11 | 25 |
foregut-midgut junction | 2.69e-11 | 25 |
septum transversum | 2.69e-11 | 25 |
omentum | 4.57e-11 | 6 |
peritoneum | 4.57e-11 | 6 |
abdominal cavity | 4.57e-11 | 6 |
visceral peritoneum | 4.57e-11 | 6 |
sac | 9.22e-11 | 26 |
breast | 1.64e-09 | 10 |
abdominal segment of trunk | 7.79e-09 | 60 |
abdomen | 7.79e-09 | 60 |
subcutaneous adipose tissue | 1.09e-08 | 3 |
chest | 1.43e-08 | 11 |
subdivision of trunk | 2.14e-08 | 112 |
gland | 8.33e-08 | 59 |
endocrine gland | 2.38e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.31e-07 | 14 |