FFCP PHASE1:Hg19::chr10:123845284..123845296,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:123845284..123845296,+ | |||
|coexpression_cluster_id=C1302 | |coexpression_cluster_id=C1302 | ||
|description=CAGE_peak_at_chr10:123845284..123845296,+ | |description=CAGE_peak_at_chr10:123845284..123845296,+ | ||
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|ontology_enrichment_celltype=CL:0002076!3.32e-30!43;CL:0002251!1.84e-21!21;CL:0000223!2.80e-20!59;CL:0002368!2.12e-16!13;CL:0000622!1.02e-15!5;CL:0000154!5.02e-13!6;CL:0000066!5.82e-12!254;CL:0002623!2.01e-10!3;CL:0002159!2.05e-10!13;CL:0002621!6.69e-10!3;CL:0002328!4.14e-09!3;CL:0000150!1.57e-08!9;CL:0000076!3.13e-08!62;CL:0002202!1.12e-07!9;CL:0002632!1.12e-07!9;CL:0000244!1.85e-07!4;CL:0000731!1.85e-07!4;CL:0000317!5.45e-07!2;CL:1000448!5.45e-07!2;CL:0002308!5.45e-07!2;CL:0002140!5.45e-07!2;CL:0001014!6.32e-07!2;CL:0001016!6.32e-07!2 | |ontology_enrichment_celltype=CL:0002076!3.32e-30!43;CL:0002251!1.84e-21!21;CL:0000223!2.80e-20!59;CL:0002368!2.12e-16!13;CL:0000622!1.02e-15!5;CL:0000154!5.02e-13!6;CL:0000066!5.82e-12!254;CL:0002623!2.01e-10!3;CL:0002159!2.05e-10!13;CL:0002621!6.69e-10!3;CL:0002328!4.14e-09!3;CL:0000150!1.57e-08!9;CL:0000076!3.13e-08!62;CL:0002202!1.12e-07!9;CL:0002632!1.12e-07!9;CL:0000244!1.85e-07!4;CL:0000731!1.85e-07!4;CL:0000317!5.45e-07!2;CL:1000448!5.45e-07!2;CL:0002308!5.45e-07!2;CL:0002140!5.45e-07!2;CL:0001014!6.32e-07!2;CL:0001016!6.32e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.86e-27;5!CL:0002623;2.79e-26;3!CL:0002251;6.84e-26;20!CL:0000154;8.90e-23;6!CL:0002076;3.89e-19;42!CL:0000150;2.86e-15;9!CL:0000240;8.15e-13;6!CL:0000311;8.15e-13;6!CL:0000079;8.15e-13;6!CL:0000237;8.15e-13;6!CL:0002621;4.85e-12;3!CL:0002159;1.56e-09;14!CL:0002336;1.68e-09;1!CL:0002261;1.68e-09;1!CL:0002170;1.68e-09;1!CL:0000244;2.57e-09;4!CL:0000731;2.57e-09;4!CL:0000362;1.01e-08;9!CL:0000312;1.89e-07;5 | |ontology_enrichment_celltype_v019=CL:0000622;2.86e-27;5!CL:0002623;2.79e-26;3!CL:0002251;6.84e-26;20!CL:0000154;8.90e-23;6!CL:0002076;3.89e-19;42!CL:0000150;2.86e-15;9!CL:0000240;8.15e-13;6!CL:0000311;8.15e-13;6!CL:0000079;8.15e-13;6!CL:0000237;8.15e-13;6!CL:0002621;4.85e-12;3!CL:0002159;1.56e-09;14!CL:0002336;1.68e-09;1!CL:0002261;1.68e-09;1!CL:0002170;1.68e-09;1!CL:0000244;2.57e-09;4!CL:0000731;2.57e-09;4!CL:0000362;1.01e-08;9!CL:0000312;1.89e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.87e-27,5;CL:0002623,2.91e-26,3;CL:0002251,6.97e-26,20;CL:0000154,8.92e-23,6;CL:0002076,3.33e-22,42;CL:0000223,1.37e-15,58;CL:0000150,2.86e-15,9;CL:0000240,5.99e-13,6;CL:0000311,5.99e-13,6;CL:0000079,5.99e-13,6;CL:0000237,5.99e-13,6;CL:0000036,5.99e-13,6;CL:0000357,5.99e-13,6;CL:0000114,5.99e-13,6;CL:0002621,5.90e-12,3;CL:0000066,9.13e-10,253;CL:0002336,1.25e-09,1;CL:0002261,1.25e-09,1;CL:0002170,1.25e-09,1;CL:0002159,1.43e-09,14;CL:0000244,2.17e-09,4;CL:0000731,2.17e-09,4;CL:0000076,2.52e-09,63;CL:0000362,9.00e-09,9;CL:0000312,1.66e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;8.15e-13;6!CL:0000114;8.15e-13;6!CL:0000223;1.02e-07;58 | |ontology_enrichment_development_v019=CL:0000357;8.15e-13;6!CL:0000114;8.15e-13;6!CL:0000223;1.02e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!8.99e-19!14 | |ontology_enrichment_disease=DOID:1749!8.99e-19!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.91e-10;1!DOID:3149;3.91e-10;1!DOID:1749;7.76e-10;14 | |ontology_enrichment_disease_v019=DOID:3151;3.91e-10;1!DOID:3149;3.91e-10;1!DOID:1749;7.76e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,3.74e-10,1;DOID:3149,3.74e-10,1;DOID:1749,8.42e-10,14 | |||
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| ||
|short_description=p@chr10:123845284..123845296,+ | |short_description=p@chr10:123845284..123845296,+ | ||
}} | }} |
Latest revision as of 11:09, 23 July 2015
Short description: | p@chr10:123845284..123845296, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123845284..123845296, + |
Coexpression cluster: | C1302_keratoacanthoma_cervical_immature_salivary_malignant_oral_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.87e-27 | 5 |
acinar cell of salivary gland | 2.91e-26 | 3 |
epithelial cell of alimentary canal | 6.97e-26 | 20 |
protein secreting cell | 8.92e-23 | 6 |
endo-epithelial cell | 3.33e-22 | 42 |
endodermal cell | 1.37e-15 | 58 |
glandular epithelial cell | 2.86e-15 | 9 |
stratified squamous epithelial cell | 5.99e-13 | 6 |
keratin accumulating cell | 5.99e-13 | 6 |
stratified epithelial cell | 5.99e-13 | 6 |
keratinizing barrier epithelial cell | 5.99e-13 | 6 |
epithelial fate stem cell | 5.99e-13 | 6 |
stratified epithelial stem cell | 5.99e-13 | 6 |
surface ectodermal cell | 5.99e-13 | 6 |
gingival epithelial cell | 5.90e-12 | 3 |
epithelial cell | 9.13e-10 | 253 |
buccal mucosa cell | 1.25e-09 | 1 |
endothelial cell of viscerocranial mucosa | 1.25e-09 | 1 |
keratinized cell of the oral mucosa | 1.25e-09 | 1 |
general ecto-epithelial cell | 1.43e-09 | 14 |
transitional epithelial cell | 2.17e-09 | 4 |
urothelial cell | 2.17e-09 | 4 |
squamous epithelial cell | 2.52e-09 | 63 |
epidermal cell | 9.00e-09 | 9 |
keratinocyte | 1.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
oral opening | 4.57e-18 | 22 |
mouth | 1.52e-17 | 29 |
stomodeum | 1.52e-17 | 29 |
mouth mucosa | 5.78e-16 | 13 |
saliva-secreting gland | 1.95e-13 | 6 |
gland of oral region | 1.95e-13 | 6 |
gland of foregut | 1.95e-13 | 6 |
oral gland | 1.95e-13 | 6 |
oral cavity | 1.95e-13 | 6 |
subdivision of head | 1.51e-12 | 49 |
surface structure | 5.21e-12 | 99 |
gingival epithelium | 5.90e-12 | 3 |
head | 8.13e-11 | 56 |
orifice | 9.52e-11 | 36 |
mucosa | 2.49e-10 | 20 |
respiratory system | 1.01e-09 | 74 |
anterior region of body | 1.21e-09 | 62 |
craniocervical region | 1.21e-09 | 62 |
mucosa of oral region | 1.69e-09 | 4 |
respiratory system mucosa | 1.69e-09 | 4 |
mammalian vulva | 2.46e-09 | 1 |
external female genitalia | 2.46e-09 | 1 |
gland of gut | 2.92e-08 | 10 |
urothelium | 1.12e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.74e-10 | 1 |
keratoacanthoma | 3.74e-10 | 1 |
squamous cell carcinoma | 8.42e-10 | 14 |