FFCP PHASE1:Hg19::chr10:18580030..18580043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:18580030..18580043,- | |||
|coexpression_cluster_id=C115 | |coexpression_cluster_id=C115 | ||
|description=CAGE_peak_at_chr10:18580030..18580043,- | |description=CAGE_peak_at_chr10:18580030..18580043,- | ||
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|ontology_enrichment_celltype=CL:0000242!1.62e-17!2;CL:0000167!1.32e-09!1;CL:0000164!1.32e-09!1;CL:0000502!1.32e-09!1;CL:0000172!1.32e-09!1;CL:0000173!1.32e-09!1;CL:0002351!1.32e-09!1;CL:0000312!1.55e-07!5;CL:0000095!5.97e-07!17;CL:0000123!5.97e-07!17 | |ontology_enrichment_celltype=CL:0000242!1.62e-17!2;CL:0000167!1.32e-09!1;CL:0000164!1.32e-09!1;CL:0000502!1.32e-09!1;CL:0000172!1.32e-09!1;CL:0000173!1.32e-09!1;CL:0002351!1.32e-09!1;CL:0000312!1.55e-07!5;CL:0000095!5.97e-07!17;CL:0000123!5.97e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.66e-21;2!CL:0000123;5.70e-21;2!CL:0000242;5.70e-21;2!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |ontology_enrichment_celltype_v019=CL:0002535;4.66e-21;2!CL:0000123;5.70e-21;2!CL:0000242;5.70e-21;2!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.66e-21,2;CL:0000242,5.70e-21,2;CL:0000312,3.22e-09,5;CL:0000240,6.78e-08,6;CL:0000311,6.78e-08,6;CL:0000079,6.78e-08,6;CL:0000237,6.78e-08,6;CL:0000036,6.78e-08,6;CL:0000357,6.78e-08,6;CL:0000114,6.78e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | ||
|ontology_enrichment_disease=DOID:2355!1.12e-09!1;DOID:4430!1.32e-09!1;DOID:4362!1.55e-07!5 | |ontology_enrichment_disease=DOID:2355!1.12e-09!1;DOID:4430!1.32e-09!1;DOID:4362!1.55e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:2355;3.30e-40;1!DOID:74;6.96e-21;2!DOID:1287;3.79e-11;4!DOID:4362;2.97e-09;5 | |ontology_enrichment_disease_v019=DOID:2355;3.30e-40;1!DOID:74;6.96e-21;2!DOID:1287;3.79e-11;4!DOID:4362;2.97e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,3.30e-40,1;DOID:74,6.96e-21,2;DOID:1287,3.79e-11,4;DOID:4362,2.97e-09,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000007;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0006955;4.66e-21;2!UBERON:0004801;4.66e-21;2!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0000007;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0006955;4.66e-21;2!UBERON:0004801;4.66e-21;2!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0006955,4.66e-21,2;UBERON:0004801,4.66e-21,2;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6 | |||
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|short_description=p@chr10:18580030..18580043,- | |short_description=p@chr10:18580030..18580043,- | ||
}} | }} |
Latest revision as of 12:23, 23 July 2015
Short description: | p@chr10:18580030..18580043, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:18580030..18580043, - |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.66e-21 | 2 |
Merkel cell | 5.70e-21 | 2 |
keratinocyte | 3.22e-09 | 5 |
stratified squamous epithelial cell | 6.78e-08 | 6 |
keratin accumulating cell | 6.78e-08 | 6 |
stratified epithelial cell | 6.78e-08 | 6 |
keratinizing barrier epithelial cell | 6.78e-08 | 6 |
epithelial fate stem cell | 6.78e-08 | 6 |
stratified epithelial stem cell | 6.78e-08 | 6 |
surface ectodermal cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
uterine epithelium | 4.66e-21 | 2 |
cervix epithelium | 4.66e-21 | 2 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.30e-40 | 1 |
hematopoietic system disease | 6.96e-21 | 2 |
cardiovascular system disease | 3.79e-11 | 4 |
cervical cancer | 2.97e-09 | 5 |