FFCP PHASE1:Hg19::chr10:21809344..21809347,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:21809344..21809347,-
|short_description=p@chr10:21809344..21809347,-
|description=CAGE_peak_at_chr10:21809344..21809347,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:21809344..21809347,- | |||
|description=CAGE_peak_at_chr10:21809344..21809347,- | |||
|id=chr10:21809344..21809347,- | |||
|ontology_enrichment_celltype=CL:0000128!6.52e-12!7;CL:0000126!6.52e-12!7;CL:0000127!6.52e-12!7;CL:0002453!6.52e-12!7;CL:0000133!4.86e-08!59;CL:0000333!8.40e-08!41;CL:0000243!6.90e-07!15;CL:0000125!6.90e-07!15;CL:0000030!6.90e-07!15;CL:0000339!6.90e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.44e-23;7!CL:0000126;1.44e-23;7!CL:0000127;1.44e-23;7!CL:0000243;1.03e-21;15!CL:0000125;1.03e-21;15!CL:0000095;1.58e-19;17!CL:0002605;1.60e-14;3!CL:0000346;1.60e-14;3!CL:1000428;1.60e-14;3!CL:0002577;1.60e-14;3!CL:0002603;1.60e-14;3!CL:0002319;5.18e-14;25!CL:0002559;2.97e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.02e-23,7;CL:0000126,2.02e-23,7;CL:0000127,2.02e-23,7;CL:0002453,2.02e-23,7;CL:0000243,1.11e-21,15;CL:0000125,1.11e-21,15;CL:0000030,1.11e-21,15;CL:0000339,1.11e-21,15;CL:0000095,1.68e-19,17;CL:0000123,1.68e-19,17;CL:0000333,2.18e-15,41;CL:0002577,1.40e-14,3;CL:0000346,1.60e-14,3;CL:1000428,1.60e-14,3;CL:0002605,1.83e-14,3;CL:0002603,2.09e-14,3;CL:0002319,5.42e-14,25;CL:0000133,4.65e-11,59;CL:0002559,2.97e-09,5;CL:0000221,3.13e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.03e-21;15!CL:0000133;1.06e-07;59 | |||
|ontology_enrichment_disease=DOID:171!3.60e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!6.11e-08!173;UBERON:0006601!6.11e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.60e-14;3!UBERON:0001992;1.60e-14;3!UBERON:0001987;3.10e-11;4!UBERON:0002073;2.97e-09;5!UBERON:0002037;6.33e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.60e-14,3;UBERON:0001992,1.60e-14,3;UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0002073,2.97e-09,5;UBERON:0005086,2.97e-09,5;UBERON:0002037,7.25e-08,6;UBERON:0006215,7.25e-08,6;UBERON:0003124,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,1.10808952269109,0.204000691244253,0.940364164434263,1.14494394852423,0.821246550437305,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0.518305275076852,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.784917590417525,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0.532844358032199,0,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.183138929636687,0.41254749960294,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.435050081742686,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0.635020748171649,0,0.561594356226918,0,0,0,0,0,0,0.425846237690326,0,0.614481528616916,0,0.333698283423817,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,0.844501632511974,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,1.798532254171,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0.157265941855896,0.54604819096007,0,0.637724760305049,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0.504143392443436,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0.527613733078862,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0.347716544605159,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594600453887843,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr10:21809344..21809347,- | |||
}} | }} |
Latest revision as of 12:32, 23 July 2015
Short description: | p@chr10:21809344..21809347, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21809344..21809347, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.02e-23 | 7 |
macroglial cell | 2.02e-23 | 7 |
astrocyte | 2.02e-23 | 7 |
oligodendrocyte precursor cell | 2.02e-23 | 7 |
glial cell (sensu Vertebrata) | 1.11e-21 | 15 |
glial cell | 1.11e-21 | 15 |
glioblast | 1.11e-21 | 15 |
glioblast (sensu Vertebrata) | 1.11e-21 | 15 |
neuron associated cell | 1.68e-19 | 17 |
neuron associated cell (sensu Vertebrata) | 1.68e-19 | 17 |
migratory neural crest cell | 2.18e-15 | 41 |
placental epithelial cell | 1.40e-14 | 3 |
hair follicle dermal papilla cell | 1.60e-14 | 3 |
stem cell of epidermis | 1.60e-14 | 3 |
astrocyte of the cerebral cortex | 1.83e-14 | 3 |
astrocyte of the cerebellum | 2.09e-14 | 3 |
neural cell | 5.42e-14 | 25 |
neurectodermal cell | 4.65e-11 | 59 |
hair follicle cell | 2.97e-09 | 5 |
ectodermal cell | 3.13e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.60e-14 | 3 |
papillary layer of dermis | 1.60e-14 | 3 |
placenta | 2.80e-11 | 4 |
allantois | 2.80e-11 | 4 |
hair follicle | 2.97e-09 | 5 |
hair follicle placode | 2.97e-09 | 5 |
cerebellum | 7.25e-08 | 6 |
rhombic lip | 7.25e-08 | 6 |
chorion | 5.38e-07 | 7 |