FFCP PHASE1:Hg19::chr10:50818183..50818194,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:50818183..50818194,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr10:50818183..50818194,- | |description=CAGE_peak_at_chr10:50818183..50818194,- | ||
|id=chr10:50818183..50818194,- | |id=chr10:50818183..50818194,- | ||
|ontology_enrichment_celltype=CL:0002537!6.05e-10!5 | |ontology_enrichment_celltype=CL:0002537!6.05e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.89e-26;5!CL:0000333;9.27e-26;5!CL:0000222;2.38e-15;1!CL:0002321;3.11e-15;15!CL:0000349;2.49e-12;19!CL:0002097;1.79e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.66e-26,5;CL:0000349,2.38e-12,19;CL:0002097,1.86e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!8.07e-24!10;DOID:169!1.43e-13!6;DOID:3095!2.68e-10!22;DOID:2994!2.68e-10!22 | |ontology_enrichment_disease=DOID:171!8.07e-24!10;DOID:169!1.43e-13!6;DOID:3095!2.68e-10!22;DOID:2994!2.68e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:171;2.98e-35;10!DOID:169;1.36e-21;6!DOID:3095;4.31e-16;22!DOID:2994;4.31e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.41e-35,10;DOID:169,1.18e-21,6;DOID:3095,3.91e-16,22;DOID:2994,3.91e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0002298!3.56e-20!8;UBERON:0005631!1.35e-16!14;UBERON:0000158!1.35e-16!14;UBERON:0000013!2.90e-16!5;UBERON:0002410!2.90e-16!5;UBERON:0006331!1.48e-14!3;UBERON:0000988!1.63e-14!3;UBERON:0000924!1.11e-12!173;UBERON:0006601!1.11e-12!173;UBERON:0000305!6.20e-12!7;UBERON:0000073!1.10e-11!94;UBERON:0001016!1.10e-11!94;UBERON:0003076!1.18e-10!15;UBERON:0003057!1.18e-10!15;UBERON:0004871!1.89e-10!8;UBERON:0002148!2.36e-10!2;UBERON:0009662!2.36e-10!2;UBERON:0002346!8.08e-10!90;UBERON:0004121!1.54e-09!169;UBERON:0004733!2.02e-09!12;UBERON:0002028!2.02e-09!12;UBERON:0007277!2.02e-09!12;UBERON:0000478!2.80e-09!24;UBERON:0000010!4.51e-09!8;UBERON:0004732!1.12e-08!13;UBERON:0002308!1.79e-08!9;UBERON:0000125!1.79e-08!9;UBERON:0001017!6.92e-08!82;UBERON:0001049!1.48e-07!57;UBERON:0005068!1.48e-07!57;UBERON:0006241!1.48e-07!57;UBERON:0007135!1.48e-07!57;UBERON:0005743!2.10e-07!86;UBERON:0001896!5.15e-07!3;UBERON:0005290!5.15e-07!3;UBERON:0010096!5.15e-07!3;UBERON:0003124!9.99e-07!7 | |ontology_enrichment_uberon=UBERON:0002298!3.56e-20!8;UBERON:0005631!1.35e-16!14;UBERON:0000158!1.35e-16!14;UBERON:0000013!2.90e-16!5;UBERON:0002410!2.90e-16!5;UBERON:0006331!1.48e-14!3;UBERON:0000988!1.63e-14!3;UBERON:0000924!1.11e-12!173;UBERON:0006601!1.11e-12!173;UBERON:0000305!6.20e-12!7;UBERON:0000073!1.10e-11!94;UBERON:0001016!1.10e-11!94;UBERON:0003076!1.18e-10!15;UBERON:0003057!1.18e-10!15;UBERON:0004871!1.89e-10!8;UBERON:0002148!2.36e-10!2;UBERON:0009662!2.36e-10!2;UBERON:0002346!8.08e-10!90;UBERON:0004121!1.54e-09!169;UBERON:0004733!2.02e-09!12;UBERON:0002028!2.02e-09!12;UBERON:0007277!2.02e-09!12;UBERON:0000478!2.80e-09!24;UBERON:0000010!4.51e-09!8;UBERON:0004732!1.12e-08!13;UBERON:0002308!1.79e-08!9;UBERON:0000125!1.79e-08!9;UBERON:0001017!6.92e-08!82;UBERON:0001049!1.48e-07!57;UBERON:0005068!1.48e-07!57;UBERON:0006241!1.48e-07!57;UBERON:0007135!1.48e-07!57;UBERON:0005743!2.10e-07!86;UBERON:0001896!5.15e-07!3;UBERON:0005290!5.15e-07!3;UBERON:0010096!5.15e-07!3;UBERON:0003124!9.99e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.27e-26;5!UBERON:0002410;9.27e-26;5!UBERON:0005631;4.08e-23;10!UBERON:0000158;4.08e-23;10!UBERON:0000305;4.23e-19;7!UBERON:0002346;2.22e-15;4!UBERON:0000923;2.22e-15;4!UBERON:0010316;2.22e-15;4!UBERON:0005291;2.22e-15;4!UBERON:0000010;1.26e-14;8!UBERON:0002050;1.69e-12;5!UBERON:0005423;1.69e-12;5!UBERON:0000478;8.11e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.82e-26,5;UBERON:0002410,7.82e-26,5;UBERON:0000305,3.86e-19,7;UBERON:0004871,7.83e-17,8;UBERON:0005631,1.20e-16,14;UBERON:0000158,1.20e-16,14;UBERON:0000010,1.15e-14,8;UBERON:0000478,7.84e-10,24 | |||
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|short_description=p@chr10:50818183..50818194,- | |short_description=p@chr10:50818183..50818194,- | ||
}} | }} |
Latest revision as of 14:02, 23 July 2015
Short description: | p@chr10:50818183..50818194, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:50818183..50818194, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.66e-26 | 5 |
extraembryonic cell | 2.38e-12 | 19 |
cortical cell of adrenal gland | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.82e-26 | 5 |
autonomic nervous system | 7.82e-26 | 5 |
amnion | 3.86e-19 | 7 |
somatic layer of lateral plate mesoderm | 7.83e-17 | 8 |
extraembryonic membrane | 1.20e-16 | 14 |
membranous layer | 1.20e-16 | 14 |
peripheral nervous system | 1.15e-14 | 8 |
extraembryonic structure | 7.84e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.41e-35 | 10 |
neuroendocrine tumor | 1.18e-21 | 6 |
germ cell and embryonal cancer | 3.91e-16 | 22 |
germ cell cancer | 3.91e-16 | 22 |