FFCP PHASE1:Hg19::chr10:5535762..5535773,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5535762..5535773,- | |||
|coexpression_cluster_id=C2064 | |||
|description=CAGE_peak_at_chr10:5535762..5535773,- | |description=CAGE_peak_at_chr10:5535762..5535773,- | ||
|id=chr10:5535762..5535773,- | |id=chr10:5535762..5535773,- | ||
|ontology_enrichment_celltype=CL:0002541!1.16e-10!3;CL:0000039!4.08e-10!7;CL:0000586!4.08e-10!7;CL:0000223!1.59e-08!59;CL:0002563!1.59e-08!4 | |ontology_enrichment_celltype=CL:0002541!1.16e-10!3;CL:0000039!4.08e-10!7;CL:0000586!4.08e-10!7;CL:0000223!1.59e-08!59;CL:0002563!1.59e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;5.94e-26;4!CL:0000039;3.29e-15;7!CL:0000586;3.29e-15;7!CL:0002253;8.28e-14;2!CL:0002231;1.30e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.94e-26,4;CL:0000039,3.29e-15,7;CL:0000586,3.29e-15,7;CL:0002253,8.28e-14,2;CL:0002231,1.30e-09,3;CL:0000223,2.81e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!3.42e-17!4;DOID:1612!3.42e-17!4;DOID:0050687!3.06e-11!143;DOID:7!1.32e-10!39;DOID:305!1.50e-10!106;DOID:1799!1.10e-08!1;DOID:10165!1.10e-08!1;DOID:1798!1.10e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.08e-25;4!DOID:1612;2.08e-25;4!DOID:299;1.44e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.84e-25,4;DOID:1612,1.84e-25,4;DOID:299,1.39e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0005153!3.46e-11!37;UBERON:0000476!1.16e-10!3;UBERON:0000920!1.16e-10!3;UBERON:0005911!2.30e-10!82;UBERON:0003124!7.74e-10!7;UBERON:0001242!1.59e-08!4;UBERON:0001262!1.59e-08!4;UBERON:0004786!1.59e-08!4;UBERON:0004808!1.59e-08!4;UBERON:0001277!1.59e-08!4;UBERON:0002171!1.84e-08!1;UBERON:0006518!1.84e-08!1;UBERON:0008949!1.84e-08!1;UBERON:0000101!1.84e-08!1;UBERON:0002167!1.84e-08!1;UBERON:0005631!2.30e-08!14;UBERON:0000158!2.30e-08!14;UBERON:0004921!4.07e-08!129;UBERON:0004185!4.07e-08!129;UBERON:0002048!7.36e-08!22;UBERON:0000117!7.36e-08!22;UBERON:0000171!7.36e-08!22;UBERON:0000170!7.36e-08!22;UBERON:0005597!7.36e-08!22;UBERON:0000118!7.36e-08!22;UBERON:0005157!8.12e-08!51;UBERON:0000915!1.04e-07!52;UBERON:0000310!3.61e-07!10;UBERON:0003350!5.60e-07!5;UBERON:0000077!7.52e-07!130 | |ontology_enrichment_uberon=UBERON:0005153!3.46e-11!37;UBERON:0000476!1.16e-10!3;UBERON:0000920!1.16e-10!3;UBERON:0005911!2.30e-10!82;UBERON:0003124!7.74e-10!7;UBERON:0001242!1.59e-08!4;UBERON:0001262!1.59e-08!4;UBERON:0004786!1.59e-08!4;UBERON:0004808!1.59e-08!4;UBERON:0001277!1.59e-08!4;UBERON:0002171!1.84e-08!1;UBERON:0006518!1.84e-08!1;UBERON:0008949!1.84e-08!1;UBERON:0000101!1.84e-08!1;UBERON:0002167!1.84e-08!1;UBERON:0005631!2.30e-08!14;UBERON:0000158!2.30e-08!14;UBERON:0004921!4.07e-08!129;UBERON:0004185!4.07e-08!129;UBERON:0002048!7.36e-08!22;UBERON:0000117!7.36e-08!22;UBERON:0000171!7.36e-08!22;UBERON:0000170!7.36e-08!22;UBERON:0005597!7.36e-08!22;UBERON:0000118!7.36e-08!22;UBERON:0005157!8.12e-08!51;UBERON:0000915!1.04e-07!52;UBERON:0000310!3.61e-07!10;UBERON:0003350!5.60e-07!5;UBERON:0000077!7.52e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;5.94e-26;4!UBERON:0001262;5.94e-26;4!UBERON:0004786;5.94e-26;4!UBERON:0004808;5.94e-26;4!UBERON:0001277;5.94e-26;4!UBERON:0000485;2.65e-15;7!UBERON:0003929;2.65e-15;7!UBERON:0003350;1.61e-13;8!UBERON:0000310;8.47e-11;10!UBERON:0001443;6.63e-10;11!UBERON:0001052;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.94e-26,4;UBERON:0001262,5.94e-26,4;UBERON:0004786,5.94e-26,4;UBERON:0004808,5.94e-26,4;UBERON:0001277,5.94e-26,4;UBERON:0003350,1.61e-13,8;UBERON:0000485,3.95e-12,9;UBERON:0000310,8.06e-11,10;UBERON:0001443,6.34e-10,11;UBERON:0003929,8.61e-08,54;UBERON:0001052,1.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71351853407327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82299432759663,0.699679999969566,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76676685265672,8.34746093010881,0.54323685961004,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,5.93682900022551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0.247247575143499,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71351853407327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82299432759663,0.699679999969566,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76676685265672,8.34746093010881,0.54323685961004,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,5.93682900022551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0.247247575143499,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:5535762..5535773,- | |short_description=p@chr10:5535762..5535773,- | ||
}} | }} |
Latest revision as of 14:12, 23 July 2015
Short description: | p@chr10:5535762..5535773, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5535762..5535773, - |
Coexpression cluster: | C2064_Intestinal_choriocarcinoma_breast_Prostate_pancreatic_colon_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.94e-26 | 4 |
germ line cell | 3.29e-15 | 7 |
germ cell | 3.29e-15 | 7 |
epithelial cell of large intestine | 8.28e-14 | 2 |
epithelial cell of prostate | 1.30e-09 | 3 |
endodermal cell | 2.81e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.94e-26 | 4 |
wall of intestine | 5.94e-26 | 4 |
gastrointestinal system mucosa | 5.94e-26 | 4 |
gastrointestinal system epithelium | 5.94e-26 | 4 |
intestinal epithelium | 5.94e-26 | 4 |
epithelium of mucosa | 1.61e-13 | 8 |
simple columnar epithelium | 3.95e-12 | 9 |
breast | 8.06e-11 | 10 |
chest | 6.34e-10 | 11 |
gut epithelium | 8.61e-08 | 54 |
rectum | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.84e-25 | 4 |
breast cancer | 1.84e-25 | 4 |
adenocarcinoma | 1.39e-09 | 25 |