FFCP PHASE1:Hg19::chr10:5847323..5847327,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5847323..5847327,- | |||
|description=CAGE_peak_at_chr10:5847323..5847327,- | |description=CAGE_peak_at_chr10:5847323..5847327,- | ||
|id=chr10:5847323..5847327,- | |id=chr10:5847323..5847327,- | ||
|ontology_enrichment_celltype=CL:0002031!1.49e-10!124;CL:0002087!7.39e-10!119;CL:0000738!1.72e-08!140;CL:0002009!5.56e-08!65;CL:0000860!1.68e-07!45;CL:0002032!2.58e-07!165;CL:0000837!2.58e-07!165;CL:0000839!2.73e-07!70;CL:0000557!2.81e-07!71;CL:0000037!3.80e-07!172;CL:0000566!3.80e-07!172;CL:0002194!3.90e-07!63;CL:0000576!3.90e-07!63;CL:0000040!3.90e-07!63;CL:0000559!3.90e-07!63;CL:0002057!6.17e-07!42 | |ontology_enrichment_celltype=CL:0002031!1.49e-10!124;CL:0002087!7.39e-10!119;CL:0000738!1.72e-08!140;CL:0002009!5.56e-08!65;CL:0000860!1.68e-07!45;CL:0002032!2.58e-07!165;CL:0000837!2.58e-07!165;CL:0000839!2.73e-07!70;CL:0000557!2.81e-07!71;CL:0000037!3.80e-07!172;CL:0000566!3.80e-07!172;CL:0002194!3.90e-07!63;CL:0000576!3.90e-07!63;CL:0000040!3.90e-07!63;CL:0000559!3.90e-07!63;CL:0002057!6.17e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.11e-10;33!CL:0002057;5.11e-10;33!CL:0000473;1.37e-08;39!CL:0000234;1.37e-08;39!CL:0000511;2.20e-07;1!CL:0002625;2.20e-07;1!CL:0000216;2.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.28e-09,120;CL:0000473,4.74e-09,48;CL:0000234,4.74e-09,48;CL:0002087,9.04e-09,115;CL:0000860,2.60e-08,42;CL:0002057,2.60e-08,42;CL:0002009,2.71e-08,61;CL:0000738,4.01e-08,136;CL:0000511,1.18e-07,1;CL:0002625,1.18e-07,1;CL:0000216,1.18e-07,1;CL:0000557,2.08e-07,67;CL:0002032,2.29e-07,161;CL:0000837,2.29e-07,161;CL:0002194,5.98e-07,59;CL:0000576,5.98e-07,59;CL:0000040,5.98e-07,59;CL:0000559,5.98e-07,59;CL:0000037,6.35e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;9.03e-07;42 | |||
|ontology_enrichment_disease=DOID:162!3.10e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.20e-07;1!UBERON:0001136;2.20e-07;1!UBERON:0001343;2.20e-07;1!UBERON:0004910;2.20e-07;1!UBERON:0004813;2.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.18e-07,1;UBERON:0001343,1.18e-07,1;UBERON:0004910,1.18e-07,1;UBERON:0005154,1.18e-07,1;UBERON:0005295,1.18e-07,1;UBERON:0004813,1.18e-07,1;UBERON:0005297,1.18e-07,1;UBERON:0005294,1.18e-07,1;UBERON:0010141,1.18e-07,1;UBERON:0005891,1.18e-07,1;UBERON:0007029,1.33e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0.572471974262113,0.273748850145768,0.376627918784408,0.229240217243854,0.328402357799783,0.314843125254717,0,0,0.464448369948228,0,0,0,1.00707360754392,0.710846162437108,0,0,0.401088894940283,0.651032612147555,0.223915474239924,0.32389366601898,0,0.290796477559129,0.755751887377619,0.970336244751265,1.39457422143411,0.822335776043652,0.619412741790207,1.7261543539329,0.768482119587302,1.18241114944293,1.37898272294647,0.645484683583826,0,0.564727018627814,0.272906150057846,0,0.612167784741805,0.641858054152187,0,0.659702600373432,1.19678194572979,1.27867425159808,0.580418477257168,0,0,3.76872997885115,4.17186334736161,0.868755378820466,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0.889509253863555,1.28019066769952,1.20118796110804,0,1.32208974556972,0,0,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0.786021525498329,0,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0.541607727530031,0.640456598628376,0.650296737799391,0.657751618414705,0.276350017785848,0.289803085735052,0,0,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.80642697289893,1.06976078313403,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.472674085820339,0.221729397462564,0.351339142772504,0.261958150995425,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0.816616685019573,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0.675105328965065,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.368965315629341,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0.738651018262192,0.468008530278475,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0.25248486685276,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0.537182889719687,0,0.394061520403854,1.07813787429759,0.385029108839245,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.82707210449155,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.966875596732978,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0.256450125116389,0,0,0,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0,1.19115887728894,0.822724546172388,0,0,0,0.106824071127473,0,0.735120647943095,0.371606350251437,0.865615277858669,0.569134746787313,0.478278818186467,0.199579371432817,0,0,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.481764225311099,0,0,0,0,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0.334330152832435,0.284136146806413,0,0,0.614321404198464,0,0.281338832821026,0.445234820091624,0.494411622680279,0.844501632511974,0,0.552567831062295,0.251932747854276,0,0.246169610922139,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,1.30213880542617,0,0,0.568967241427498,0.254253650292766,0.236387681767936,0.689486746482929,0,0,0,0.241192877250816,0,1.10579259931225,0.591095237907095,0,0.435753854075961,0.278847488557207,0.230850775511391,0.227884111694002,0.23056390438806,0.538545866458633,0.108647371922008,0,0,0,0,0.941881538370149,0.166211681900156,0.676786981851542,0.19606253431774,0,1.13852239634511,0,0.210998064528027,0.326465616318295,0.565412285735763,0.649165919226273,0,0.619202951523374,0.611030144933625,0.593042257361244,0,0.626531697032732,0.269604531922708,0,0,0.364909578431332,0.391329237864179,0.242780379534093,0.789168805698781,0,0.30607276163049,0.37911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| ||
|short_description=p@chr10:5847323..5847327,- | |short_description=p@chr10:5847323..5847327,- | ||
}} | }} |
Latest revision as of 14:15, 23 July 2015
Short description: | p@chr10:5847323..5847327, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5847323..5847327, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.28e-09 | 120 |
defensive cell | 4.74e-09 | 48 |
phagocyte | 4.74e-09 | 48 |
nongranular leukocyte | 9.04e-09 | 115 |
classical monocyte | 2.60e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.60e-08 | 42 |
macrophage dendritic cell progenitor | 2.71e-08 | 61 |
leukocyte | 4.01e-08 | 136 |
androgen binding protein secreting cell | 1.18e-07 | 1 |
seminiferous tubule epithelial cell | 1.18e-07 | 1 |
Sertoli cell | 1.18e-07 | 1 |
granulocyte monocyte progenitor cell | 2.08e-07 | 67 |
hematopoietic oligopotent progenitor cell | 2.29e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.29e-07 | 161 |
monopoietic cell | 5.98e-07 | 59 |
monocyte | 5.98e-07 | 59 |
monoblast | 5.98e-07 | 59 |
promonocyte | 5.98e-07 | 59 |
hematopoietic stem cell | 6.35e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.18e-07 | 1 |
seminiferous tubule of testis | 1.18e-07 | 1 |
epithelium of male gonad | 1.18e-07 | 1 |
epithelial cord | 1.18e-07 | 1 |
sex cord | 1.18e-07 | 1 |
seminiferous tubule epithelium | 1.18e-07 | 1 |
testis sex cord | 1.18e-07 | 1 |
genital ridge | 1.18e-07 | 1 |
primitive sex cord of indifferent gonad | 1.18e-07 | 1 |
coelomic epithelium | 1.18e-07 | 1 |
surface | 1.33e-07 | 1 |