FFCP PHASE1:Hg19::chr10:6261377..6261401,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6261377..6261401,+ | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_at_chr10:6261377..6261401,+ | |description=CAGE_peak_at_chr10:6261377..6261401,+ | ||
|id=chr10:6261377..6261401,+ | |id=chr10:6261377..6261401,+ | ||
|ontology_enrichment_celltype=CL:0000775!3.01e-07!3;CL:0002166!3.61e-07!3 | |ontology_enrichment_celltype=CL:0000775!3.01e-07!3;CL:0002166!3.61e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000346;9.45e-18;3!CL:1000428;9.45e-18;3!CL:0000775;9.45e-18;3!CL:0000307;9.45e-18;3!CL:0002559;3.26e-11;5!CL:0000094;1.69e-07;8!CL:0002202;8.37e-07;9!CL:0002632;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,8.00e-18,3;CL:0000346,9.46e-18,3;CL:1000428,9.46e-18,3;CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0002559,3.26e-11,5;CL:0000094,1.59e-07,8;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;9.45e-18;3 | |||
|ontology_enrichment_disease=DOID:1749!1.32e-07!14 | |ontology_enrichment_disease=DOID:1749!1.32e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003343!2.40e-10!4;UBERON:0004785!2.40e-10!4;UBERON:0003729!2.29e-08!5;UBERON:0001896!9.89e-07!3;UBERON:0005290!9.89e-07!3;UBERON:0010096!9.89e-07!3 | |ontology_enrichment_uberon=UBERON:0003343!2.40e-10!4;UBERON:0004785!2.40e-10!4;UBERON:0003729!2.29e-08!5;UBERON:0001896!9.89e-07!3;UBERON:0005290!9.89e-07!3;UBERON:0010096!9.89e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;9.45e-18;3!UBERON:0001992;9.45e-18;3!UBERON:0002346;8.81e-14;4!UBERON:0000923;8.81e-14;4!UBERON:0010316;8.81e-14;4!UBERON:0005291;8.81e-14;4!UBERON:0002050;2.66e-11;5!UBERON:0005423;2.66e-11;5!UBERON:0002073;3.26e-11;5!UBERON:0003126;2.18e-08;7!UBERON:0001005;2.18e-08;7!UBERON:0002067;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,9.46e-18,3;UBERON:0001992,9.46e-18,3;UBERON:0002073,3.26e-11,5;UBERON:0005086,3.26e-11,5;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7;UBERON:0002067,8.37e-07,9;UBERON:0004016,8.37e-07,9;UBERON:0010083,8.37e-07,9 | |||
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| ||
|short_description=p@chr10:6261377..6261401,+ | |short_description=p@chr10:6261377..6261401,+ | ||
}} | }} |
Latest revision as of 14:31, 23 July 2015
Short description: | p@chr10:6261377..6261401, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6261377..6261401, + |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 8.00e-18 | 3 |
hair follicle dermal papilla cell | 9.46e-18 | 3 |
stem cell of epidermis | 9.46e-18 | 3 |
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
hair follicle cell | 3.26e-11 | 5 |
granulocyte | 1.59e-07 | 8 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 9.46e-18 | 3 |
papillary layer of dermis | 9.46e-18 | 3 |
hair follicle | 3.26e-11 | 5 |
hair follicle placode | 3.26e-11 | 5 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
dermis | 8.37e-07 | 9 |
dermatome | 8.37e-07 | 9 |
future dermis | 8.37e-07 | 9 |