FFCP PHASE1:Hg19::chr10:63839926..63839931,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:63839926..63839931,- | |||
|coexpression_cluster_id=C3032 | |||
|description=CAGE_peak_at_chr10:63839926..63839931,- | |description=CAGE_peak_at_chr10:63839926..63839931,- | ||
|id=chr10:63839926..63839931,- | |id=chr10:63839926..63839931,- | ||
|ontology_enrichment_celltype=CL:0000945!5.58e-39!24;CL:0000826!5.58e-39!24;CL:0000236!1.87e-35!14;CL:0000542!3.23e-21!53;CL:0000051!3.23e-21!53;CL:0000838!7.42e-19!52;CL:0000817!1.53e-16!3;CL:0000785!1.03e-11!2;CL:0000955!1.03e-11!2;CL:0000818!1.03e-11!2;CL:0000954!1.03e-11!2;CL:0000816!1.03e-11!2;CL:0002032!1.05e-08!165;CL:0000837!1.05e-08!165;CL:0002087!1.70e-08!119;CL:0000037!3.61e-08!172;CL:0000566!3.61e-08!172;CL:0000988!1.78e-07!182;CL:0002031!6.40e-07!124;CL:0000946!9.91e-07!1;CL:0000786!9.91e-07!1;CL:0000980!9.91e-07!1 | |ontology_enrichment_celltype=CL:0000945!5.58e-39!24;CL:0000826!5.58e-39!24;CL:0000236!1.87e-35!14;CL:0000542!3.23e-21!53;CL:0000051!3.23e-21!53;CL:0000838!7.42e-19!52;CL:0000817!1.53e-16!3;CL:0000785!1.03e-11!2;CL:0000955!1.03e-11!2;CL:0000818!1.03e-11!2;CL:0000954!1.03e-11!2;CL:0000816!1.03e-11!2;CL:0002032!1.05e-08!165;CL:0000837!1.05e-08!165;CL:0002087!1.70e-08!119;CL:0000037!3.61e-08!172;CL:0000566!3.61e-08!172;CL:0000988!1.78e-07!182;CL:0002031!6.40e-07!124;CL:0000946!9.91e-07!1;CL:0000786!9.91e-07!1;CL:0000980!9.91e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000946;6.62e-41;1!CL:0000786;6.62e-41;1!CL:0000785;2.70e-40;1!CL:0000819;2.70e-40;1!CL:0000945;5.36e-27;24!CL:0000542;3.42e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,3.49e-79,2;CL:0000955,3.49e-79,2;CL:0000818,3.49e-79,2;CL:0000954,3.49e-79,2;CL:0000816,3.49e-79,2;CL:0000817,2.87e-53,3;CL:0000946,6.62e-41,1;CL:0000786,6.62e-41,1;CL:0000980,6.62e-41,1;CL:0000819,3.30e-40,1;CL:0000945,5.55e-27,24;CL:0000826,5.55e-27,24;CL:0000542,2.83e-19,53;CL:0000051,2.83e-19,53;CL:0000838,7.03e-13,52;CL:0000236,2.37e-12,14;CL:0002087,3.65e-09,115;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000954;2.86e-79;2!CL:0000051;3.42e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!7.53e-10!51;DOID:0060083!7.53e-10!51;DOID:0060058!1.88e-08!10;DOID:162!1.92e-07!235;DOID:14566!3.51e-07!239 | |ontology_enrichment_disease=DOID:2531!7.53e-10!51;DOID:0060083!7.53e-10!51;DOID:0060058!1.88e-08!10;DOID:162!1.92e-07!235;DOID:14566!3.51e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.70e-40;1!DOID:8675;2.70e-40;1!DOID:12603;2.70e-40;1!DOID:0060058;3.65e-36;10!DOID:2531;6.15e-08;51!DOID:0060083;6.15e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.21e-40,1;DOID:0060073,3.30e-40,1;DOID:8675,3.30e-40,1;DOID:0060058,3.88e-36,10;DOID:2531,4.46e-13,51;DOID:0060083,4.46e-13,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,2.40148321798935,2.41687695228617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.85803175125719,0.432807638929335,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64209310294099,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45701962667338,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,2.40148321798935,2.41687695228617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.85803175125719,0.432807638929335,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64209310294099,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45701962667338,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:63839926..63839931,- | |short_description=p@chr10:63839926..63839931,- | ||
}} | }} |
Latest revision as of 14:37, 23 July 2015
Short description: | p@chr10:63839926..63839931, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:63839926..63839931, - |
Coexpression cluster: | C3032_plasma_Burkitt_diffuse_immature_lymphangiectasia_b_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 3.49e-79 | 2 |
pre-B-II cell | 3.49e-79 | 2 |
transitional stage B cell | 3.49e-79 | 2 |
small pre-B-II cell | 3.49e-79 | 2 |
immature B cell | 3.49e-79 | 2 |
precursor B cell | 2.87e-53 | 3 |
antibody secreting cell | 6.62e-41 | 1 |
plasma cell | 6.62e-41 | 1 |
plasmablast | 6.62e-41 | 1 |
B-1 B cell | 3.30e-40 | 1 |
lymphocyte of B lineage | 5.55e-27 | 24 |
pro-B cell | 5.55e-27 | 24 |
lymphocyte | 2.83e-19 | 53 |
common lymphoid progenitor | 2.83e-19 | 53 |
lymphoid lineage restricted progenitor cell | 7.03e-13 | 52 |
B cell | 2.37e-12 | 14 |
nongranular leukocyte | 3.65e-09 | 115 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.21e-40 | 1 |
lymphatic system cancer | 3.30e-40 | 1 |
lymphosarcoma | 3.30e-40 | 1 |
lymphoma | 3.88e-36 | 10 |
hematologic cancer | 4.46e-13 | 51 |
immune system cancer | 4.46e-13 | 51 |