FFCP PHASE1:Hg19::chr10:75012560..75012580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000457147,uc001jtu.1_5end | |association_with_transcript=11bp_to_ENST00000457147,uc001jtu.1_5end | ||
|cluster_id=chr10:75012560..75012580,+ | |||
|description=CAGE_peak_3_at_ENST00000457147_5end,CAGE_peak_3_at_uc001jtu.1_5end | |description=CAGE_peak_3_at_ENST00000457147_5end,CAGE_peak_3_at_uc001jtu.1_5end | ||
|id=chr10:75012560..75012580,+ | |id=chr10:75012560..75012580,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.91e-11!254;CL:0000223!5.62e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.91e-11!254;CL:0000223!5.62e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000083;2.14e-07;4!CL:0001014;4.94e-07;2!CL:0001016;4.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.60e-07,4;CL:0001014,4.42e-07,2;CL:0001016,4.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.97e-32!239;DOID:162!8.11e-31!235;DOID:0050687!5.26e-25!143;DOID:305!3.00e-19!106;DOID:0050686!6.93e-11!137;DOID:1749!6.70e-08!14 | |ontology_enrichment_disease=DOID:14566!4.97e-32!239;DOID:162!8.11e-31!235;DOID:0050687!5.26e-25!143;DOID:305!3.00e-19!106;DOID:0050686!6.93e-11!137;DOID:1749!6.70e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.04e-25;14!DOID:4362;1.15e-10;5!DOID:1793;2.14e-07;4!DOID:4074;4.94e-07;2!DOID:4905;4.94e-07;2!DOID:3498;4.94e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.19e-24,14;DOID:305,7.15e-12,106;DOID:162,8.30e-12,235;DOID:0050687,1.19e-11,143;DOID:14566,2.32e-11,239;DOID:4362,2.00e-10,5;DOID:1793,1.60e-07,4;DOID:4074,2.52e-07,2;DOID:4905,2.52e-07,2;DOID:3498,2.52e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;6.96e-09;6!UBERON:0001560;6.96e-09;6!UBERON:0001264;8.24e-08;10!UBERON:0003343;2.14e-07;4!UBERON:0004785;2.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.09e-08,6;UBERON:0001560,1.09e-08,6;UBERON:0001264,6.88e-08,10;UBERON:0003343,2.51e-07,4;UBERON:0004785,2.51e-07,4 | |||
|phase1_expression=0,0,0.704772020479856,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0.376627918784408,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0.6024118375565,0,0.697204805222715,0.142169232487422,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,1.180258620683,0,1.43921049299656,0,0,0.473447805734733,0,0,0,0,0.541607727530031,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,1.06976078313403,0.868946423296794,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0,0,0.132957960518865,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,1.19168262731897,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0.204154171254893,0,0.413303124703062,0,0.494533858557114,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0.211931901159562,0.600182192168805,0.103052529238439,0,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.368199594569197,0,0,0.503760491138201,0.169560592310488,0,0.272746120590835,0.573609190778008,0.487894824518382,0.265059536642971,0.348581828608555,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0.709840800239063,0.674338760312407,0,0.55146986366197,0.217879444092406,0.71181185733329,0.134831308160164,0.98110732562673,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.737930631258681,0.171567810298526,0.109750285408626,2.24803506515239,0.100528972411631,0.370353780634118,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0,0.93733833986777,0.335964256397719,0.567100388969546,1.07470227243418,0.290633938513962,0.383382679165211,0.985326475791887,0.176096868026452,0.621984346622316,0.288239906833923,0.12624243342638,0.444485260045183,1.14596527667483,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0.43596006883328,0.36669142910475,0.258543431515556,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.723906533337896,0,0,0.336255431980582,0.788123040807709,1.94064817373566,0.898401253958239,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,0.604780586659361,0.248107807818777,0.306923946576125,0.280660094433074,0.384417447767103,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.464841513839837,0.846016147141356,0,0.644566922551274,0.229628896329213,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0.650756789328606,0.206082023295445,0.27470839445503,0.330037999682352,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0,0.0852266274161009,0,0.991709492165869,0.576570202095319,0.382838137483752,0.50578890427775,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0,0.196498082026242,0,0,0.211107635297664,0,0,0,0.769776901804097,0.670302275535787,3.26672954583968,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,1.22520107990516,0,0.432807638929335,0.142283686696828,0.318852545457645,0.199579371432817,0.383010740264733,0.211673582723883,0.324621940274555,0.561594356226918,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0.425846237690326,0.687010689511529,0.307240764308458,0,0.166849141711909,0.586164286206121,0.556812347790485,0,0.270455678475983,0.99921590399346,0,0.748562161632879,0,0,1.00299045849731,0.568272293612826,0.23874448473769,0,0,0.994147647766298,0.140669416410513,0.667852230137435,0,2.11125408127993,0,0,0,0.613612095012929,0,0,0.988551862620595,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.524759999977174,0,0.227586896570999,0,0.709163045303809,0,0,0.520874984799877,0,0.241192877250816,0,0,0,0.438770794307945,2.06983080686081,3.76444109552229,0,0.569710279235006,0.23056390438806,0.359030577639089,0.217294743844016,0.31900115973192,0,0.5330347760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| ||
|short_description=p3@ENST00000457147,p3@uc001jtu.1 | |short_description=p3@ENST00000457147,p3@uc001jtu.1 | ||
}} | }} |
Latest revision as of 15:31, 23 July 2015
Short description: | p3@ENST00000457147, p3@uc001jtu.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000457147_5end, CAGE_peak_3_at_uc001jtu.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000457147, uc001jtu.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.60e-07 | 4 |
CD1a-positive Langerhans cell | 4.42e-07 | 2 |
immature CD1a-positive Langerhans cell | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 1.09e-08 | 6 |
neck of organ | 1.09e-08 | 6 |
pancreas | 6.88e-08 | 10 |
mucosa of oral region | 2.51e-07 | 4 |
respiratory system mucosa | 2.51e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.19e-24 | 14 |
carcinoma | 7.15e-12 | 106 |
cancer | 8.30e-12 | 235 |
cell type cancer | 1.19e-11 | 143 |
disease of cellular proliferation | 2.32e-11 | 239 |
cervical cancer | 2.00e-10 | 5 |
pancreatic cancer | 1.60e-07 | 4 |
pancreas adenocarcinoma | 2.52e-07 | 2 |
pancreatic carcinoma | 2.52e-07 | 2 |
pancreatic ductal adenocarcinoma | 2.52e-07 | 2 |