Personal tools

FFCP PHASE1:Hg19::chr10:93390550..93390566,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=5507
|EntrezGene=entrezgene:5507
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=9293
|HGNC=HGNC:9293
|TSSclassifier=weak
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=60bp_to_AB528213,AM393091_5end
|association_with_transcript=60bp_to_AB528213,AM393091_5end
|cluster_id=chr10:93390550..93390566,-
|description=CAGE_peak_3_at_PPP1R3C_5end
|description=CAGE_peak_3_at_PPP1R3C_5end
|id=chr10:93390550..93390566,-
|id=chr10:93390550..93390566,-

Revision as of 16:45, 23 July 2015

Short description:p3@PPP1R3C
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_PPP1R3C_5end
Coexpression cluster:NA
Association with transcript: 60bp_to_AB528213, AM393091_5end
EntrezGene:5507
HGNC: 9293
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
2
4
6
8
10




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data