FFCP PHASE1:Hg19::chr11:109962897..109962926,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:109962897..109962926,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr11:109962897..109962926,+ | |||
|id=chr11:109962897..109962926,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.11e-07!10;CL:0000541!1.11e-07!10;CL:0001014!5.04e-07!2;CL:0001016!5.04e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.92e-53;3!CL:0002566;1.81e-40;1!CL:0000148;3.05e-36;10!CL:0000147;3.45e-26;14!CL:0000710;1.26e-18;20!CL:0000075;4.96e-14;27!CL:0002077;1.97e-11;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.19e-53,3;CL:0002566,9.91e-41,1;CL:0000148,2.70e-36,10;CL:0000541,2.70e-36,10;CL:0000147,3.17e-26,14;CL:0000710,1.19e-18,20;CL:0000075,4.74e-14,27;CL:0002077,2.48e-11,34;CL:0000333,3.98e-09,41 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.71e-14;3!UBERON:0003353;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.56e-07!34;UBERON:0002780!6.86e-07!41;UBERON:0001890!6.86e-07!41;UBERON:0006240!6.86e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.97e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.673344455816265,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46045156871989,5.34783795781589,1.17217447210047,0,0.308482478109971,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,1.00108261702862,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:109962897..109962926,+ | |||
}} |
Latest revision as of 17:59, 23 July 2015
Short description: | p@chr11:109962897..109962926, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:109962897..109962926, + |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.19e-53 | 3 |
dark melanocyte | 9.91e-41 | 1 |
melanocyte | 2.70e-36 | 10 |
melanoblast | 2.70e-36 | 10 |
pigment cell | 3.17e-26 | 14 |
neurecto-epithelial cell | 1.19e-18 | 20 |
columnar/cuboidal epithelial cell | 4.74e-14 | 27 |
ecto-epithelial cell | 2.48e-11 | 34 |
migratory neural crest cell | 3.98e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.97e-09 | 5 |