FFCP PHASE1:Hg19::chr11:110250298..110250302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:110250298..110250302,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr11:110250298..110250302,+ | |description=CAGE_peak_at_chr11:110250298..110250302,+ | ||
|id=chr11:110250298..110250302,+ | |id=chr11:110250298..110250302,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.57e-25!3;CL:0000039!3.17e-11!7;CL:0000586!3.17e-11!7;CL:0002557!4.50e-09!1;CL:0002563!5.30e-09!4;CL:0002274!3.67e-07!5;CL:0000457!3.67e-07!5;CL:0002191!3.67e-07!5;CL:0000097!3.67e-07!5;CL:0000831!3.67e-07!5;CL:0002028!3.67e-07!5 | |ontology_enrichment_celltype=CL:0002541!4.57e-25!3;CL:0000039!3.17e-11!7;CL:0000586!3.17e-11!7;CL:0002557!4.50e-09!1;CL:0002563!5.30e-09!4;CL:0002274!3.67e-07!5;CL:0000457!3.67e-07!5;CL:0002191!3.67e-07!5;CL:0000097!3.67e-07!5;CL:0000831!3.67e-07!5;CL:0002028!3.67e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.13e-30;3!CL:0000039;1.35e-13;7!CL:0000586;1.35e-13;7!CL:0000349;3.93e-11;19!CL:0000083;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.47e-30,3;CL:0000039,1.23e-13,7;CL:0000586,1.23e-13,7;CL:0000349,3.80e-11,19;CL:0000083,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.33e-23;1 | |||
|ontology_enrichment_disease=DOID:1799!1.32e-09!1;DOID:10165!1.32e-09!1;DOID:1798!1.32e-09!1 | |ontology_enrichment_disease=DOID:1799!1.32e-09!1;DOID:10165!1.32e-09!1;DOID:1798!1.32e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;3.67e-23;1!DOID:10165;3.67e-23;1!DOID:1798;3.67e-23;1!DOID:1793;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.10e-23,1;DOID:10165,4.10e-23,1;DOID:1798,4.10e-23,1;DOID:1793,9.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.57e-25!3;UBERON:0000920!4.57e-25!3;UBERON:0003124!5.04e-19!7;UBERON:0005631!1.51e-14!14;UBERON:0000158!1.51e-14!14;UBERON:0002336!5.28e-09!1;UBERON:0001018!5.28e-09!1;UBERON:0002473!5.28e-09!1;UBERON:0005340!5.28e-09!1;UBERON:0002316!5.28e-09!1;UBERON:0003544!5.28e-09!1;UBERON:0001020!5.28e-09!1;UBERON:0005970!5.28e-09!1;UBERON:0002437!5.28e-09!1;UBERON:0001242!5.30e-09!4;UBERON:0001262!5.30e-09!4;UBERON:0004786!5.30e-09!4;UBERON:0004808!5.30e-09!4;UBERON:0001277!5.30e-09!4;UBERON:0000485!1.65e-08!9;UBERON:0000478!2.07e-08!24;UBERON:0004923!4.85e-08!57;UBERON:0003350!2.28e-07!5 | |ontology_enrichment_uberon=UBERON:0000476!4.57e-25!3;UBERON:0000920!4.57e-25!3;UBERON:0003124!5.04e-19!7;UBERON:0005631!1.51e-14!14;UBERON:0000158!1.51e-14!14;UBERON:0002336!5.28e-09!1;UBERON:0001018!5.28e-09!1;UBERON:0002473!5.28e-09!1;UBERON:0005340!5.28e-09!1;UBERON:0002316!5.28e-09!1;UBERON:0003544!5.28e-09!1;UBERON:0001020!5.28e-09!1;UBERON:0005970!5.28e-09!1;UBERON:0002437!5.28e-09!1;UBERON:0001242!5.30e-09!4;UBERON:0001262!5.30e-09!4;UBERON:0004786!5.30e-09!4;UBERON:0004808!5.30e-09!4;UBERON:0001277!5.30e-09!4;UBERON:0000485!1.65e-08!9;UBERON:0000478!2.07e-08!24;UBERON:0004923!4.85e-08!57;UBERON:0003350!2.28e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.13e-30;3!UBERON:0000920;2.13e-30;3!UBERON:0005631;1.67e-20;10!UBERON:0000158;1.67e-20;10!UBERON:0000478;3.68e-15;24!UBERON:0001987;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.47e-30,3;UBERON:0003124,3.18e-29,7;UBERON:0005631,1.19e-25,14;UBERON:0000158,1.19e-25,14;UBERON:0000478,3.55e-15,24;UBERON:0001987,6.87e-07,4;UBERON:0004340,6.87e-07,4 | |||
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|short_description=p@chr11:110250298..110250302,+ | |short_description=p@chr11:110250298..110250302,+ | ||
}} | }} |
Latest revision as of 18:02, 23 July 2015
Short description: | p@chr11:110250298..110250302, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:110250298..110250302, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.47e-30 | 3 |
germ line cell | 1.23e-13 | 7 |
germ cell | 1.23e-13 | 7 |
extraembryonic cell | 3.80e-11 | 19 |
epithelial cell of pancreas | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.47e-30 | 3 |
chorion | 3.18e-29 | 7 |
extraembryonic membrane | 1.19e-25 | 14 |
membranous layer | 1.19e-25 | 14 |
extraembryonic structure | 3.55e-15 | 24 |
placenta | 6.87e-07 | 4 |
allantois | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.10e-23 | 1 |
endocrine pancreas cancer | 4.10e-23 | 1 |
pancreatic endocrine carcinoma | 4.10e-23 | 1 |
pancreatic cancer | 9.11e-07 | 4 |