FFCP PHASE1:Hg19::chr11:111225012..111225024,-: Difference between revisions
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|id=chr11:111225012..111225024,-
|short_description=p@chr11:111225012..111225024,-
|description=CAGE_peak_at_chr11:111225012..111225024,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:111225012..111225024,- | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_at_chr11:111225012..111225024,- | |||
|id=chr11:111225012..111225024,- | |||
|ontology_enrichment_celltype=CL:0000945!7.65e-77!24;CL:0000826!7.65e-77!24;CL:0000542!1.09e-38!53;CL:0000051!1.09e-38!53;CL:0000236!2.03e-36!14;CL:0000838!6.09e-36!52;CL:0002087!2.37e-15!119;CL:0000817!3.29e-14!3;CL:0000738!3.27e-12!140;CL:0002031!8.39e-12!124;CL:0000785!2.86e-10!2;CL:0000955!2.86e-10!2;CL:0000818!2.86e-10!2;CL:0000954!2.86e-10!2;CL:0000816!2.86e-10!2;CL:0000037!6.35e-09!172;CL:0000566!6.35e-09!172;CL:0002032!1.42e-08!165;CL:0000837!1.42e-08!165;CL:0000988!3.86e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.90e-109;24!CL:0000236;5.75e-39;13!CL:0000542;2.69e-33;53!CL:0000785;2.63e-12;1!CL:0000819;2.63e-12;1!CL:0000946;1.01e-11;1!CL:0000786;1.01e-11;1!CL:0002087;3.67e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.14e-109,24;CL:0000826,4.14e-109,24;CL:0000542,1.09e-54,53;CL:0000051,1.09e-54,53;CL:0000838,2.63e-49,52;CL:0000236,2.29e-47,14;CL:0002087,8.41e-24,115;CL:0000785,1.66e-22,2;CL:0000955,1.66e-22,2;CL:0000818,1.66e-22,2;CL:0000954,1.66e-22,2;CL:0000816,1.66e-22,2;CL:0002031,5.79e-20,120;CL:0000738,8.42e-20,136;CL:0002032,2.20e-16,161;CL:0000837,2.20e-16,161;CL:0000037,1.32e-15,168;CL:0000817,2.42e-15,3;CL:0000988,1.07e-14,177;CL:0000819,2.63e-12,1;CL:0000946,5.62e-12,1;CL:0000786,5.62e-12,1;CL:0000980,5.62e-12,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.69e-33;53!CL:0000954;3.00e-22;2 | |||
|ontology_enrichment_disease=DOID:0060058!5.81e-16!10;DOID:2531!8.49e-07!51;DOID:0060083!8.49e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.28e-27;10!DOID:0060073;2.63e-12;1!DOID:8675;2.63e-12;1!DOID:630;1.01e-11;1!DOID:0050177;1.01e-11;1!DOID:12603;1.01e-11;1!DOID:0050427;1.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.91e-27,10;DOID:0060073,2.63e-12,1;DOID:8675,2.63e-12,1;DOID:630,8.64e-12,1;DOID:0050177,8.64e-12,1;DOID:0050427,8.64e-12,1;DOID:12603,1.19e-11,1;DOID:2531,3.79e-07,51;DOID:0060083,3.79e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.02e-13!3;UBERON:0004854!2.02e-13!3;UBERON:0009034!2.02e-13!3;UBERON:0002095!2.02e-13!3;UBERON:0004782!2.02e-13!3;UBERON:0003281!2.02e-13!3;UBERON:0009664!2.02e-13!3;UBERON:0002296!2.02e-13!3;UBERON:0005602!2.02e-13!3;UBERON:0001179!2.02e-13!3;UBERON:0006293!2.02e-13!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr11:111225012..111225024,- | |||
}} | }} |
Latest revision as of 18:04, 23 July 2015
Short description: | p@chr11:111225012..111225024, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:111225012..111225024, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.14e-109 | 24 |
pro-B cell | 4.14e-109 | 24 |
lymphocyte | 1.09e-54 | 53 |
common lymphoid progenitor | 1.09e-54 | 53 |
lymphoid lineage restricted progenitor cell | 2.63e-49 | 52 |
B cell | 2.29e-47 | 14 |
nongranular leukocyte | 8.41e-24 | 115 |
mature B cell | 1.66e-22 | 2 |
pre-B-II cell | 1.66e-22 | 2 |
transitional stage B cell | 1.66e-22 | 2 |
small pre-B-II cell | 1.66e-22 | 2 |
immature B cell | 1.66e-22 | 2 |
hematopoietic lineage restricted progenitor cell | 5.79e-20 | 120 |
leukocyte | 8.42e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.20e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-16 | 161 |
hematopoietic stem cell | 1.32e-15 | 168 |
precursor B cell | 2.42e-15 | 3 |
hematopoietic cell | 1.07e-14 | 177 |
B-1 B cell | 2.63e-12 | 1 |
antibody secreting cell | 5.62e-12 | 1 |
plasma cell | 5.62e-12 | 1 |
plasmablast | 5.62e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.91e-27 | 10 |
lymphatic system cancer | 2.63e-12 | 1 |
lymphosarcoma | 2.63e-12 | 1 |
genetic disease | 8.64e-12 | 1 |
monogenic disease | 8.64e-12 | 1 |
xeroderma pigmentosum | 8.64e-12 | 1 |
acute leukemia | 1.19e-11 | 1 |
hematologic cancer | 3.79e-07 | 51 |
immune system cancer | 3.79e-07 | 51 |