FFCP PHASE1:Hg19::chr11:120302511..120302522,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:120302511..120302522,+ to FFCP PHASE1:Hg19::chr11:120302511..120302522,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:120302511..120302522,+ | |||
|description=CAGE_peak_at_chr11:120302511..120302522,+ | |||
|id=chr11:120302511..120302522,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.07e-08;2!CL:0001014;2.07e-08;2!CL:0001016;2.07e-08;2!CL:0000558;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.61e-08,2;CL:0001016,1.61e-08,2;CL:0000764,1.86e-08,2;CL:0000765,1.86e-08,2;CL:0000050,1.86e-08,2;CL:0000038,1.86e-08,2;CL:0000558,1.86e-08,2;CL:0000547,1.86e-08,2;CL:0000549,1.86e-08,2;CL:0000550,1.86e-08,2;CL:0000552,1.86e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.24e-08;2!DOID:4236;1.24e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.20e-08,2;DOID:4236,1.20e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.72e-08!115;UBERON:0000475!1.26e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.24e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.29e-08,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,0.994192127183747,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0.85870796139317,0.273748850145768,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.534880391567015,0,0,0.670700859703636,0,0,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.515262646192195,0,0.37223371266318,0,0.194874010322397,0.252433774244115,0.276149695926898,0.484938170456436,0.355009592516614,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0.220587945464788,0,0,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0.245976877086227,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0,0.951270761172991,0,0,0,0.234004265139238,0,0.93733833986777,0.503946384596579,0.141775097242386,0,0,0,0,0.176096868026452,0,0.144119953416961,0.37872730027914,0.190493682876507,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.61642896765115,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.36807447515742,0,0,1.03985430765404,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0,0,1.03850885836724,0,0.120859449591622,0,0.552485933615378,0.229628896329213,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,1.31555925987561,0.522870902049801,0,0,0,0.206082023295445,0,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0.424216295861138,0,0.551365343546124,0,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,1.01489521846434,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0.284136146806413,0,0,0,0,0,0.333926115068718,0.329607748453519,0,0.398495976502139,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,0,0.174919999992391,0.724999575434793,0,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0.653630781113941,0,0.153900517007594,0,0.23056390438806,0.0897576444097721,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0.335643173951685,0,0,0.210998064528027,0.326465616318295,0.141353071433941,0.216388639742091,0,0.265372693510018,0,0,0.370691816839509,0,0.067401132980677,0,0,0,0.19566461893209,0.485560759068186,0.394584402849391,0,0.61214552326098,0.063186579628488,0.450970258243478,0.207376382794494,0.664653872707185,0.661983911750998,0,0,0,0.277349346026277,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0.0730893170861856,0.410577285266046,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0.379864775735272,0,0,0,0,0.288180834308212,0.229073192331831,0,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0.407992870545287,0,0,0.136905378891993,0,0.429765441419957,0.525774708558629,0.279282401272254,0.229160424011684,0,0.798716001995964,0.429226048136571,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0.795229689809303,0.408610218334727,0,0.137539436597234,0.415440338029185,0.2249738915515,1.5476039091159,0.182248669974074,0,0.630445658393585,0.0524545881349981,0,0,0,0,0,0.25426853765475,0.542999601753713,0,0.653174720218818,0,0.164185041498678,0.170388021785422,0,0.293104467356165,0,0.387848869084652,0.39669780522807,0,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0.886068179966986,2.07444650333337,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0.686520205190771,0.302461847526478,0.310874401165561,0.147855149989634,0.477890301491107,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,1.85613503951397,0.796191777397232,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0.463044948647668,0.489473409012935,0,0.308801447160972,0,0.176689145945881,0.38582807654183,0.168942440653073,0,0.345430341731199,0.303859956177382,0.553033744606923,0,0.132864840313363,0,2.29326894192489,0.491545817507439,0.211312123358627,0,0.106691729694141,0.172214979660816,0,0,0.139879507719444,0.622077260032973,0,0.107824811396682,0.157265941855896,0,0,0,0.495743057036009,0.558644917973244,0,0.0788617450012534,0,0.352675943690684,0.3062454773532,0.128458450192919,0,0.478901577171454,0,0.504143392443436,0.138314504928436,0.484426936895553,0,0,0.11796972334774,0.550285795565037,0.115525666150338,0,0,0.397832444232549,0.0752103283492573,0.40341013740704,0.781514011233092,0,0.49131575253029,0,0.270150338473579,0,0,0.126831620387814,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0,0,0.135939465953663,0.0657727735628491,0.236387681767936,0,0.078493092850514,0,0,0,0,1.43325506366115,0.285906176706625,0.316027223465453,0,0,0.801711364730253,0.414432328326074,0.3414369541879,0,0,0,0.170426809518315,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0.754814217833368,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0.401206833445841,0,0,0.573358332605805,0.315543124386369,0.135982980381829,0,0,1.11598505450025,0.462175628631418,0.432626562123789,0.126166424835079,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0.448527450322454,0.12729431655633,0.404234377916439,0.217716747896961,0,0,0,0,0,0.533636729388577,0,0.269475606319761,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,0.994192127183747,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0.85870796139317,0.273748850145768,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.534880391567015,0,0,0.670700859703636,0,0,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.515262646192195,0,0.37223371266318,0,0.194874010322397,0.252433774244115,0.276149695926898,0.484938170456436,0.355009592516614,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0.220587945464788,0,0,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0.245976877086227,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0,0.951270761172991,0,0,0,0.234004265139238,0,0.93733833986777,0.503946384596579,0.141775097242386,0,0,0,0,0.176096868026452,0,0.144119953416961,0.37872730027914,0.190493682876507,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.61642896765115,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.36807447515742,0,0,1.03985430765404,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0,0,1.03850885836724,0,0.120859449591622,0,0.552485933615378,0.229628896329213,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,1.31555925987561,0.522870902049801,0,0,0,0.206082023295445,0,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0.424216295861138,0,0.551365343546124,0,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,1.01489521846434,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0.284136146806413,0,0,0,0,0,0.333926115068718,0.329607748453519,0,0.398495976502139,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,0,0.174919999992391,0.724999575434793,0,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0.653630781113941,0,0.153900517007594,0,0.23056390438806,0.0897576444097721,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0.335643173951685,0,0,0.210998064528027,0.326465616318295,0.141353071433941,0.216388639742091,0,0.265372693510018,0,0,0.370691816839509,0,0.067401132980677,0,0,0,0.19566461893209,0.485560759068186,0.394584402849391,0,0.61214552326098,0.063186579628488,0.450970258243478,0.207376382794494,0.664653872707185,0.661983911750998,0,0,0,0.277349346026277,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0.0730893170861856,0.410577285266046,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0.379864775735272,0,0,0,0,0.288180834308212,0.229073192331831,0,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0.407992870545287,0,0,0.136905378891993,0,0.429765441419957,0.525774708558629,0.279282401272254,0.229160424011684,0,0.798716001995964,0.429226048136571,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0.795229689809303,0.408610218334727,0,0.137539436597234,0.415440338029185,0.2249738915515,1.5476039091159,0.182248669974074,0,0.630445658393585,0.0524545881349981,0,0,0,0,0,0.25426853765475,0.542999601753713,0,0.653174720218818,0,0.164185041498678,0.170388021785422,0,0.293104467356165,0,0.387848869084652,0.39669780522807,0,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0.886068179966986,2.07444650333337,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0.686520205190771,0.302461847526478,0.310874401165561,0.147855149989634,0.477890301491107,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,1.85613503951397,0.796191777397232,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0.463044948647668,0.489473409012935,0,0.308801447160972,0,0.176689145945881,0.38582807654183,0.168942440653073,0,0.345430341731199,0.303859956177382,0.553033744606923,0,0.132864840313363,0,2.29326894192489,0.491545817507439,0.211312123358627,0,0.106691729694141,0.172214979660816,0,0,0.139879507719444,0.622077260032973,0,0.107824811396682,0.157265941855896,0,0,0,0.495743057036009,0.558644917973244,0,0.0788617450012534,0,0.352675943690684,0.3062454773532,0.128458450192919,0,0.478901577171454,0,0.504143392443436,0.138314504928436,0.484426936895553,0,0,0.11796972334774,0.550285795565037,0.115525666150338,0,0,0.397832444232549,0.0752103283492573,0.40341013740704,0.781514011233092,0,0.49131575253029,0,0.270150338473579,0,0,0.126831620387814,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0,0,0.135939465953663,0.0657727735628491,0.236387681767936,0,0.078493092850514,0,0,0,0,1.43325506366115,0.285906176706625,0.316027223465453,0,0,0.801711364730253,0.414432328326074,0.3414369541879,0,0,0,0.170426809518315,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0.754814217833368,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0.401206833445841,0,0,0.573358332605805,0.315543124386369,0.135982980381829,0,0,1.11598505450025,0.462175628631418,0.432626562123789,0.126166424835079,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0.448527450322454,0.12729431655633,0.404234377916439,0.217716747896961,0,0,0,0,0,0.533636729388577,0,0.269475606319761,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr11:120302511..120302522,+ | |||
}} | }} |
Latest revision as of 19:07, 23 July 2015
Short description: | p@chr11:120302511..120302522, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:120302511..120302522, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.61e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.61e-08 | 2 |
erythroid lineage cell | 1.86e-08 | 2 |
erythroblast | 1.86e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 1.86e-08 | 2 |
erythroid progenitor cell | 1.86e-08 | 2 |
reticulocyte | 1.86e-08 | 2 |
proerythroblast | 1.86e-08 | 2 |
basophilic erythroblast | 1.86e-08 | 2 |
polychromatophilic erythroblast | 1.86e-08 | 2 |
orthochromatic erythroblast | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.20e-08 | 2 |
carcinosarcoma | 1.20e-08 | 2 |