FFCP PHASE1:Hg19::chr11:12211454..12211464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:12211454..12211464,+ | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_at_chr11:12211454..12211464,+ | |description=CAGE_peak_at_chr11:12211454..12211464,+ | ||
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|ontology_enrichment_celltype=CL:0002076!3.89e-22!43;CL:0000066!1.88e-17!254;CL:0002621!1.14e-15!3;CL:0002166!1.32e-15!3;CL:0000223!3.17e-15!59;CL:0002251!1.83e-13!21;CL:0002368!3.82e-13!13;CL:0002159!4.35e-13!13;CL:0000076!4.04e-12!62;CL:0000244!6.86e-12!4;CL:0000731!6.86e-12!4;CL:0002327!2.43e-11!4;CL:0000068!1.11e-07!3;CL:0000069!1.11e-07!3;CL:0000307!1.11e-07!3;CL:0000377!1.11e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.89e-22!43;CL:0000066!1.88e-17!254;CL:0002621!1.14e-15!3;CL:0002166!1.32e-15!3;CL:0000223!3.17e-15!59;CL:0002251!1.83e-13!21;CL:0002368!3.82e-13!13;CL:0002159!4.35e-13!13;CL:0000076!4.04e-12!62;CL:0000244!6.86e-12!4;CL:0000731!6.86e-12!4;CL:0002327!2.43e-11!4;CL:0000068!1.11e-07!3;CL:0000069!1.11e-07!3;CL:0000307!1.11e-07!3;CL:0000377!1.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000317;2.74e-12;2!CL:1000448;2.74e-12;2!CL:0002308;2.74e-12;2!CL:0002140;2.74e-12;2!CL:0002076;7.33e-09;42!CL:0002166;1.26e-08;3!CL:0002231;1.26e-08;3!CL:0000307;1.26e-08;3!CL:0002621;1.26e-08;3!CL:0002368;9.35e-08;13!CL:0002159;3.23e-07;14!CL:0000244;8.85e-07;4!CL:0000731;8.85e-07;4 | |ontology_enrichment_celltype_v019=CL:0000317;2.74e-12;2!CL:1000448;2.74e-12;2!CL:0002308;2.74e-12;2!CL:0002140;2.74e-12;2!CL:0002076;7.33e-09;42!CL:0002166;1.26e-08;3!CL:0002231;1.26e-08;3!CL:0000307;1.26e-08;3!CL:0002621;1.26e-08;3!CL:0002368;9.35e-08;13!CL:0002159;3.23e-07;14!CL:0000244;8.85e-07;4!CL:0000731;8.85e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.59e-12,2;CL:1000448,2.59e-12,2;CL:0002308,2.59e-12,2;CL:0002140,2.59e-12,2;CL:0002076,9.04e-09,42;CL:0002621,1.12e-08,3;CL:0002231,1.30e-08,3;CL:0000068,1.40e-08,3;CL:0000069,1.40e-08,3;CL:0000307,1.40e-08,3;CL:0000377,1.40e-08,3;CL:0002166,1.51e-08,3;CL:0002368,9.84e-08,13;CL:0002159,3.44e-07,14;CL:0000244,7.70e-07,4;CL:0000731,7.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.26e-08;3 | |ontology_enrichment_development_v019=CL:0000377;1.26e-08;3 | ||
|ontology_enrichment_disease=DOID:1749!2.13e-26!14 | |ontology_enrichment_disease=DOID:1749!2.13e-26!14 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.33e-23;1!DOID:0060061;1.33e-23;1!DOID:8691;1.33e-23;1 | |ontology_enrichment_disease_v019=DOID:0060060;1.33e-23;1!DOID:0060061;1.33e-23;1!DOID:8691;1.33e-23;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.34e-23,1;DOID:0060061,1.34e-23,1;DOID:8691,1.34e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!6.55e-16!5;UBERON:0001949!1.14e-15!3;UBERON:0005910!2.79e-13!6;UBERON:0001708!7.94e-12!4;UBERON:0001704!7.94e-12!4;UBERON:0001911!2.43e-11!4;UBERON:0005333!2.43e-11!4;UBERON:0008425!2.43e-11!4;UBERON:0005311!2.43e-11!4;UBERON:0003729!2.90e-09!5;UBERON:0002090!5.00e-08!6;UBERON:0004119!8.49e-08!169;UBERON:0000925!8.49e-08!169;UBERON:0006595!8.49e-08!169;UBERON:0000161!1.20e-07!35;UBERON:0001004!2.21e-07!72 | |ontology_enrichment_uberon=UBERON:0000365!6.55e-16!5;UBERON:0001949!1.14e-15!3;UBERON:0005910!2.79e-13!6;UBERON:0001708!7.94e-12!4;UBERON:0001704!7.94e-12!4;UBERON:0001911!2.43e-11!4;UBERON:0005333!2.43e-11!4;UBERON:0008425!2.43e-11!4;UBERON:0005311!2.43e-11!4;UBERON:0003729!2.90e-09!5;UBERON:0002090!5.00e-08!6;UBERON:0004119!8.49e-08!169;UBERON:0000925!8.49e-08!169;UBERON:0006595!8.49e-08!169;UBERON:0000161!1.20e-07!35;UBERON:0001004!2.21e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.74e-12;2!UBERON:0007771;2.74e-12;2!UBERON:0003297;2.74e-12;2!UBERON:0001821;2.74e-12;2!UBERON:0003487;2.74e-12;2!UBERON:0001820;2.74e-12;2!UBERON:0001949;1.26e-08;3!UBERON:0000486;2.85e-08;12!UBERON:0001708;8.85e-07;4!UBERON:0008895;8.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002419;2.74e-12;2!UBERON:0007771;2.74e-12;2!UBERON:0003297;2.74e-12;2!UBERON:0001821;2.74e-12;2!UBERON:0003487;2.74e-12;2!UBERON:0001820;2.74e-12;2!UBERON:0001949;1.26e-08;3!UBERON:0000486;2.85e-08;12!UBERON:0001708;8.85e-07;4!UBERON:0008895;8.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.59e-12,2;UBERON:0007771,2.59e-12,2;UBERON:0003297,2.59e-12,2;UBERON:0001821,2.59e-12,2;UBERON:0003487,2.59e-12,2;UBERON:0001820,2.59e-12,2;UBERON:0005089,2.59e-12,2;UBERON:0005088,2.59e-12,2;UBERON:0001949,1.12e-08,3 | |||
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|short_description=p@chr11:12211454..12211464,+ | |short_description=p@chr11:12211454..12211464,+ | ||
}} | }} |
Latest revision as of 19:18, 23 July 2015
Short description: | p@chr11:12211454..12211464, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12211454..12211464, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.59e-12 | 2 |
epithelial cell of sweat gland | 2.59e-12 | 2 |
epithelial cell of skin gland | 2.59e-12 | 2 |
acinar cell of sebaceous gland | 2.59e-12 | 2 |
endo-epithelial cell | 9.04e-09 | 42 |
gingival epithelial cell | 1.12e-08 | 3 |
epithelial cell of prostate | 1.30e-08 | 3 |
duct epithelial cell | 1.40e-08 | 3 |
branched duct epithelial cell | 1.40e-08 | 3 |
tracheal epithelial cell | 1.40e-08 | 3 |
tracheoblast | 1.40e-08 | 3 |
epithelial cell of Malassez | 1.51e-08 | 3 |
respiratory epithelial cell | 9.84e-08 | 13 |
general ecto-epithelial cell | 3.44e-07 | 14 |
transitional epithelial cell | 7.70e-07 | 4 |
urothelial cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.59e-12 | 2 |
epidermis gland | 2.59e-12 | 2 |
gland of integumental system | 2.59e-12 | 2 |
sebaceous gland | 2.59e-12 | 2 |
skin sebaceous gland | 2.59e-12 | 2 |
sweat gland | 2.59e-12 | 2 |
sweat gland placode | 2.59e-12 | 2 |
sebaceous gland placode | 2.59e-12 | 2 |
gingival epithelium | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.34e-23 | 1 |
cutaneous T cell lymphoma | 1.34e-23 | 1 |
mycosis fungoides | 1.34e-23 | 1 |