FFCP PHASE1:Hg19::chr11:16766670..16766674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000472332_5end | |association_with_transcript=0bp_to_ENST00000472332_5end | ||
|cluster_id=chr11:16766670..16766674,+ | |||
|description=CAGE_peak_1_at_ENST00000472332_5end | |description=CAGE_peak_1_at_ENST00000472332_5end | ||
|id=chr11:16766670..16766674,+ | |id=chr11:16766670..16766674,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.82e-20;6!CL:0000404;2.82e-20;6!CL:0002564;8.66e-11;3!CL:0000346;2.61e-10;3!CL:1000428;2.61e-10;3!CL:0000785;2.37e-08;1!CL:0000819;2.37e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.97e-20,6;CL:0000031,2.97e-20,6;CL:0000404,2.97e-20,6;CL:0000047,3.07e-15,8;CL:0002564,7.87e-11,3;CL:0000346,2.06e-10,3;CL:1000428,2.06e-10,3;CL:0000819,1.84e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000031;2.82e-20;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;7.00e-09;1!DOID:0060061;7.00e-09;1!DOID:8691;7.00e-09;1!DOID:0060073;2.37e-08;1!DOID:8675;2.37e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.01e-09,1;DOID:0060061,7.01e-09,1;DOID:8691,7.01e-09,1;DOID:0060073,1.84e-08,1;DOID:8675,1.84e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.24e-13;5!UBERON:0002216;1.24e-13;5!UBERON:0011134;1.24e-13;5!UBERON:0002209;1.24e-13;5!UBERON:0002213;1.24e-13;5!UBERON:0007844;1.24e-13;5!UBERON:0011138;1.24e-13;5!UBERON:0001130;1.24e-13;5!UBERON:0001066;1.24e-13;5!UBERON:0001468;1.24e-13;5!UBERON:0002242;8.66e-11;3!UBERON:0000412;2.61e-10;3!UBERON:0001992;2.61e-10;3!UBERON:0004905;1.04e-08;8!UBERON:0000982;1.04e-08;8!UBERON:0004770;1.04e-08;8!UBERON:0002146;2.37e-08;1!UBERON:0005623;2.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,8.61e-14,5;UBERON:0002216,8.61e-14,5;UBERON:0011134,8.61e-14,5;UBERON:0002209,8.61e-14,5;UBERON:0002213,8.61e-14,5;UBERON:0005856,8.61e-14,5;UBERON:0005866,8.61e-14,5;UBERON:0005863,8.61e-14,5;UBERON:0007844,8.61e-14,5;UBERON:0011138,8.61e-14,5;UBERON:0001130,8.61e-14,5;UBERON:0001066,8.61e-14,5;UBERON:0001468,8.61e-14,5;UBERON:0002242,7.87e-11,3;UBERON:0003068,7.87e-11,3;UBERON:0002328,7.87e-11,3;UBERON:0004880,7.87e-11,3;UBERON:0000412,2.06e-10,3;UBERON:0001992,2.06e-10,3;UBERON:0004905,8.34e-09,8;UBERON:0000982,8.34e-09,8;UBERON:0004770,8.34e-09,8;UBERON:0002146,2.64e-08,1;UBERON:0005623,2.64e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,1.65698687863958,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0,0,0.863077176966451,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0.520237390239513,0.493313713811028,1.38175008892924,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0.370784442784429,0,0,0,0,0,0,0,2.58070378531837,0,0,0,1.37559020970034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,1.23633464639278,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0,0.538168907066586,0,0,0.300091096084402,0,0,0,0.168776332241266,0,2.27190396819703,0.276149695926898,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0,0.646882724578552,0.128343036279748,0,0,0,0.167516265334349,2.55175500661265,0,0,0,0.24538298343828,2.50085260529839,2.71265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0.862856803274467,0.106727557803444,0,0,0,0.496215615637554,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,1.29549549661284,4.62681758070868,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0,0,0,0,0,0.576570202095319,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,2.68084838594413,0,0,0.424216295861138,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0.280797178113459,0.456469358066384,0.313359791546046,0,0,0,0,0,0,0,0.223676107892416,0.500547425135725,0,0,0,0,0.33307196799782,0,0.37428108081644,0,0.242721043499027,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.341380344856499,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0.885741385813839,0,0,0.331737779793674,0,0.438770794307945,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0.189753732724185,0.317873157960757,0.632994193584081,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,1.45963831372533,0,0,0,1.20990716048664,0,0,0.300646838828985,0.103688191397247,1.32930774541437,0.661983911750998,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0,0.219267951258557,0.164230914106418,0,0,0,0.137041924646751,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0,1.3749625440701,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0,0.0846733320657845,0,0,10.9312140956213,4.53880140770872,6.64704540846696,0.2249738915515,0,0,0,0,0,0,0.717149357331379,0.383830394638891,0,0,0.25426853765475,1.62899880526114,0.864221491201268,0.326587360109409,0,0.082092520749339,0.170388021785422,0.453248366080503,0,0,0,0,0,0,0,0,0.414239055347196,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.249960815924213,0,0,0.470531639396343,0,0.434763085832475,0.149254802886874,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.829412415681711,0,1.04349012362347,0,0.380805212168795,0.406870733204662,0,0,0.464033759878494,0,0.800055529326307,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0.276516872303462,0,0,0,0,0.245772908753719,0,4.59971010466339,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.637724760305049,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0.40341013740704,0,0.523813388962845,0.655087670040387,0,0,0.781078098613847,0,0,0.546974809018219,0,0,0.175871244359621,0.127762427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| 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| ||
|short_description=p1@ENST00000472332 | |short_description=p1@ENST00000472332 | ||
}} | }} |
Latest revision as of 20:24, 23 July 2015
Short description: | p1@ENST00000472332 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000472332_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472332_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.97e-20 | 6 |
neuroblast | 2.97e-20 | 6 |
electrically signaling cell | 2.97e-20 | 6 |
neuronal stem cell | 3.07e-15 | 8 |
nucleus pulposus cell of intervertebral disc | 7.87e-11 | 3 |
hair follicle dermal papilla cell | 2.06e-10 | 3 |
stem cell of epidermis | 2.06e-10 | 3 |
B-1 B cell | 1.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 8.61e-14 | 5 |
symphysis | 8.61e-14 | 5 |
nonsynovial joint | 8.61e-14 | 5 |
fibrous joint | 8.61e-14 | 5 |
cartilaginous joint | 8.61e-14 | 5 |
developing mesenchymal condensation | 8.61e-14 | 5 |
pre-cartilage condensation | 8.61e-14 | 5 |
cartilaginous condensation | 8.61e-14 | 5 |
cartilage element | 8.61e-14 | 5 |
post-cranial axial skeletal system | 8.61e-14 | 5 |
vertebral column | 8.61e-14 | 5 |
intervertebral disk | 8.61e-14 | 5 |
intervertebral joint | 8.61e-14 | 5 |
nucleus pulposus | 7.87e-11 | 3 |
axial mesoderm | 7.87e-11 | 3 |
notochord | 7.87e-11 | 3 |
chordamesoderm | 7.87e-11 | 3 |
dermal papilla | 2.06e-10 | 3 |
papillary layer of dermis | 2.06e-10 | 3 |
articulation | 8.34e-09 | 8 |
skeletal joint | 8.34e-09 | 8 |
articular system | 8.34e-09 | 8 |
pulmonary valve | 2.64e-08 | 1 |
semi-lunar valve | 2.64e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.01e-09 | 1 |
cutaneous T cell lymphoma | 7.01e-09 | 1 |
mycosis fungoides | 7.01e-09 | 1 |
lymphatic system cancer | 1.84e-08 | 1 |
lymphosarcoma | 1.84e-08 | 1 |