FFCP PHASE1:Hg19::chr11:1799798..1799824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-180bp_to_ENST00000449749_5end | |||
|cluster_id=chr11:1799798..1799824,- | |||
|description=CAGE_peak_1_at_ENST00000449749_5end | |||
|id=chr11:1799798..1799824,- | |||
|ontology_enrichment_celltype=CL:0002057!1.07e-11!42;CL:0000860!1.37e-10!45;CL:0002194!6.89e-07!63;CL:0000576!6.89e-07!63;CL:0000040!6.89e-07!63;CL:0000559!6.89e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.47e-17;33!CL:0002057;1.47e-17;33!CL:0000473;5.35e-11;39!CL:0000234;5.35e-11;39!CL:0000576;3.35e-09;48!CL:1001319;3.43e-08;1!CL:1000600;3.43e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.28e-13,42;CL:0002057,1.28e-13,42;CL:0000473,1.05e-11,48;CL:0000234,1.05e-11,48;CL:0002194,5.03e-09,59;CL:0000576,5.03e-09,59;CL:0000040,5.03e-09,59;CL:0000559,5.03e-09,59;CL:0002009,1.11e-08,61;CL:1001319,3.80e-08,1;CL:1000600,3.80e-08,1;CL:0000839,6.60e-08,66;CL:0000557,9.12e-08,67;CL:0000766,4.03e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;6.01e-10;42 | |||
|ontology_enrichment_disease=DOID:1749!2.60e-20!14;DOID:305!3.16e-11!106;DOID:0050687!9.98e-09!143;DOID:162!1.95e-07!235;DOID:14566!4.73e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.19e-16;14!DOID:3151;1.31e-07;1!DOID:3149;1.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.01e-16,14;DOID:305,4.74e-08,106;DOID:3151,1.04e-07,1;DOID:3149,1.04e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002075!1.68e-09!18;UBERON:0003343!2.65e-09!4;UBERON:0004785!2.65e-09!4;UBERON:0000344!8.73e-08!12;UBERON:0003729!2.09e-07!5;UBERON:0002294!4.85e-07!7;UBERON:0001173!4.85e-07!7;UBERON:0004912!4.85e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.43e-08;1!UBERON:0001256;3.43e-08;1!UBERON:0001259;3.43e-08;1!UBERON:0000997;4.50e-08;1!UBERON:0005056;4.50e-08;1!UBERON:0004176;4.50e-08;1!UBERON:0004913;6.52e-08;1!UBERON:0003703;6.52e-08;1!UBERON:0001174;6.52e-08;1!UBERON:0004914;6.52e-08;1!UBERON:0003343;1.57e-07;4!UBERON:0004785;1.57e-07;4!UBERON:0002394;1.70e-07;4!UBERON:0003928;1.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.80e-08,1;UBERON:0001256,3.80e-08,1;UBERON:0001259,3.80e-08,1;UBERON:0000997,4.66e-08,1;UBERON:0005056,4.66e-08,1;UBERON:0004913,5.33e-08,1;UBERON:0003703,5.33e-08,1;UBERON:0001174,5.33e-08,1;UBERON:0004914,5.33e-08,1;UBERON:0003343,1.31e-07,4;UBERON:0004785,1.31e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,1.30858414901608,4.53451132426571,2.42584061187816,0.929716147622738,2.05583944010913,1.54853185447552,0,0,0,0,0,0,1.31769637679823,3.82068610080984,3.14612878223118,1.22433556948361,1.60464513538047,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3080511260475,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.781552381608161,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0,0,0,0,0,0,0,0,0,0.409074730008619,0,0,2.24670877868317,0.179021174675609,0,0.394573622547734,0,0,0,0,0,0.260427761085233,0,0,4.43794448313449,4.32231205497703,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,1.9566461893209,0.728341138602278,0,0,0,0,0,0,0.664653872707185,0,1.2557316736289,2.38944859545918,0,0,0,3.13575671726008,0.435296032902013,0,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0,0,0.0801588202515337,0.426905989478705,0.19980960958213,0.144090417154106,0,0,0,0,0.471388069233591,0.271808412147228,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,5.63852017853338,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,6.7242742308212,0.733714394086716,1.84841065840541,0,0,0,0,0,0,0,0,2.95712172434091,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66855397145913,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0.705789743431384,3.12941330087756,1.46067277649303,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.286888821570705,0,4.1515666991597,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p1@ENST00000449749 | |||
}} | }} |
Latest revision as of 20:34, 23 July 2015
Short description: | p1@ENST00000449749 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000449749_5end |
Coexpression cluster: | NA |
Association with transcript: | -180bp_to_ENST00000449749_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.28e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-13 | 42 |
defensive cell | 1.05e-11 | 48 |
phagocyte | 1.05e-11 | 48 |
monopoietic cell | 5.03e-09 | 59 |
monocyte | 5.03e-09 | 59 |
monoblast | 5.03e-09 | 59 |
promonocyte | 5.03e-09 | 59 |
macrophage dendritic cell progenitor | 1.11e-08 | 61 |
bladder cell | 3.80e-08 | 1 |
lower urinary tract cell | 3.80e-08 | 1 |
myeloid lineage restricted progenitor cell | 6.60e-08 | 66 |
granulocyte monocyte progenitor cell | 9.12e-08 | 67 |
myeloid leukocyte | 4.03e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.80e-08 | 1 |
wall of urinary bladder | 3.80e-08 | 1 |
mucosa of urinary bladder | 3.80e-08 | 1 |
mammalian vulva | 4.66e-08 | 1 |
external female genitalia | 4.66e-08 | 1 |
hepatopancreatic ampulla | 5.33e-08 | 1 |
extrahepatic bile duct | 5.33e-08 | 1 |
common bile duct | 5.33e-08 | 1 |
duodenal papilla | 5.33e-08 | 1 |
mucosa of oral region | 1.31e-07 | 4 |
respiratory system mucosa | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.01e-16 | 14 |
carcinoma | 4.74e-08 | 106 |
skin squamous cell carcinoma | 1.04e-07 | 1 |
keratoacanthoma | 1.04e-07 | 1 |