FFCP PHASE1:Hg19::chr11:1949831..1949837,+: Difference between revisions
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|id=chr11:1949831..1949837,+
|short_description=p@chr11:1949831..1949837,+
|description=CAGE_peak_at_chr11:1949831..1949837,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:1949831..1949837,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr11:1949831..1949837,+ | |||
|id=chr11:1949831..1949837,+ | |||
|ontology_enrichment_celltype=CL:0002541!4.68e-22!3;CL:0002537!9.32e-14!5;CL:0000349!1.11e-10!3;CL:0002577!1.11e-10!3;CL:0002581!1.52e-08!1;CL:0002616!1.63e-08!1;CL:1001319!3.83e-08!1;CL:1000600!3.83e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.84e-53;19!CL:0002537;1.78e-51;5!CL:0002577;1.98e-38;3!CL:0002581;2.73e-29;1!CL:0002541;1.04e-10;3!CL:0000134;8.73e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.61e-53,19;CL:0002537,1.94e-51,5;CL:0002577,1.80e-38,3;CL:0002581,4.20e-29,1;CL:0002541,8.99e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.14e-49!14;UBERON:0000158!3.14e-49!14;UBERON:0003124!3.75e-36!7;UBERON:0000478!4.96e-28!24;UBERON:0004923!9.82e-25!57;UBERON:0000476!4.68e-22!3;UBERON:0000920!4.68e-22!3;UBERON:0000305!1.14e-16!7;UBERON:0001987!1.20e-16!4;UBERON:0004340!1.20e-16!4;UBERON:0005406!2.36e-15!2;UBERON:0004871!1.31e-14!8;UBERON:0004645!3.83e-08!1;UBERON:0001256!3.83e-08!1;UBERON:0001259!3.83e-08!1;UBERON:0003343!1.28e-07!4;UBERON:0004785!1.28e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.57e-45;10!UBERON:0000158;1.57e-45;10!UBERON:0000478;1.93e-42;24!UBERON:0000305;4.63e-37;7!UBERON:0001987;3.92e-29;4!UBERON:0005406;2.21e-15;2!UBERON:0003124;1.04e-10;3!UBERON:0000920;1.04e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.07e-72,14;UBERON:0000158,2.07e-72,14;UBERON:0000478,1.73e-42,24;UBERON:0000305,4.92e-37,7;UBERON:0003124,7.12e-37,7;UBERON:0004871,1.59e-32,8;UBERON:0001987,3.65e-29,4;UBERON:0004340,3.65e-29,4;UBERON:0004923,1.04e-15,66;UBERON:0005406,2.74e-15,2;UBERON:0000920,8.99e-11,3 | |||
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|short_description=p@chr11:1949831..1949837,+ | |||
}} | }} |
Latest revision as of 20:49, 23 July 2015
Short description: | p@chr11:1949831..1949837, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1949831..1949837, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.61e-53 | 19 |
amnion mesenchymal stem cell | 1.94e-51 | 5 |
placental epithelial cell | 1.80e-38 | 3 |
perirenal preadipocyte | 4.20e-29 | 1 |
chorionic membrane mesenchymal stem cell | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.07e-72 | 14 |
membranous layer | 2.07e-72 | 14 |
extraembryonic structure | 1.73e-42 | 24 |
amnion | 4.92e-37 | 7 |
chorion | 7.12e-37 | 7 |
somatic layer of lateral plate mesoderm | 1.59e-32 | 8 |
placenta | 3.65e-29 | 4 |
allantois | 3.65e-29 | 4 |
organ component layer | 1.04e-15 | 66 |
perirenal fat | 2.74e-15 | 2 |
egg chorion | 8.99e-11 | 3 |