FFCP PHASE1:Hg19::chr11:1971324..1971344,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1971324..1971344,+ | |||
|coexpression_cluster_id=C360 | |coexpression_cluster_id=C360 | ||
|description=CAGE_peak_at_chr11:1971324..1971344,+ | |description=CAGE_peak_at_chr11:1971324..1971344,+ | ||
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|ontology_enrichment_celltype=CL:0000188!8.94e-15!9;CL:0000349!4.90e-13!3;CL:0002577!4.90e-13!3;CL:0000136!3.14e-11!15;CL:0002536!8.75e-09!2;CL:0002537!5.74e-08!5 | |ontology_enrichment_celltype=CL:0000188!8.94e-15!9;CL:0000349!4.90e-13!3;CL:0002577!4.90e-13!3;CL:0000136!3.14e-11!15;CL:0002536!8.75e-09!2;CL:0002537!5.74e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.28e-64;19!CL:0002577;7.56e-47;3!CL:0002537;2.20e-28;5!CL:0002536;5.49e-09;2!CL:0000188;1.20e-07;9 | |ontology_enrichment_celltype_v019=CL:0000349;2.28e-64;19!CL:0002577;7.56e-47;3!CL:0002537;2.20e-28;5!CL:0002536;5.49e-09;2!CL:0000188;1.20e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.70e-64,19;CL:0002577,7.56e-47,3;CL:0002537,1.91e-28,5;CL:0002536,5.49e-09,2;CL:0000188,1.20e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.39e-26!14;UBERON:0000158!1.39e-26!14;UBERON:0000478!8.45e-18!24;UBERON:0001987!5.37e-16!4;UBERON:0004340!5.37e-16!4;UBERON:0000305!3.00e-14!7;UBERON:0003124!5.42e-14!7;UBERON:0004923!2.83e-13!57;UBERON:0004871!2.01e-12!8 | |ontology_enrichment_uberon=UBERON:0005631!1.39e-26!14;UBERON:0000158!1.39e-26!14;UBERON:0000478!8.45e-18!24;UBERON:0001987!5.37e-16!4;UBERON:0004340!5.37e-16!4;UBERON:0000305!3.00e-14!7;UBERON:0003124!5.42e-14!7;UBERON:0004923!2.83e-13!57;UBERON:0004871!2.01e-12!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.37e-51;24!UBERON:0005631;2.27e-38;10!UBERON:0000158;2.27e-38;10!UBERON:0000305;2.06e-35;7!UBERON:0001987;2.36e-35;4 | |ontology_enrichment_uberon_v019=UBERON:0000478;7.37e-51;24!UBERON:0005631;2.27e-38;10!UBERON:0000158;2.27e-38;10!UBERON:0000305;2.06e-35;7!UBERON:0001987;2.36e-35;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.85e-69,14;UBERON:0000158,1.85e-69,14;UBERON:0000478,5.84e-51,24;UBERON:0003124,1.65e-35,7;UBERON:0000305,1.81e-35,7;UBERON:0001987,2.36e-35,4;UBERON:0004340,2.36e-35,4;UBERON:0004871,4.23e-31,8;UBERON:0004923,4.42e-18,66;UBERON:0000995,3.07e-07,21;UBERON:0005795,6.22e-07,22;UBERON:0003975,6.22e-07,22 | |||
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| ||
|short_description=p@chr11:1971324..1971344,+ | |short_description=p@chr11:1971324..1971344,+ | ||
}} | }} |
Latest revision as of 20:50, 23 July 2015
Short description: | p@chr11:1971324..1971344, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1971324..1971344, + |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.70e-64 | 19 |
placental epithelial cell | 7.56e-47 | 3 |
amnion mesenchymal stem cell | 1.91e-28 | 5 |
amniotic epithelial cell | 5.49e-09 | 2 |
cell of skeletal muscle | 1.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.85e-69 | 14 |
membranous layer | 1.85e-69 | 14 |
extraembryonic structure | 5.84e-51 | 24 |
chorion | 1.65e-35 | 7 |
amnion | 1.81e-35 | 7 |
placenta | 2.36e-35 | 4 |
allantois | 2.36e-35 | 4 |
somatic layer of lateral plate mesoderm | 4.23e-31 | 8 |
organ component layer | 4.42e-18 | 66 |
uterus | 3.07e-07 | 21 |
embryonic uterus | 6.22e-07 | 22 |
internal female genitalia | 6.22e-07 | 22 |