FFCP PHASE1:Hg19::chr11:2154041..2154052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=117bp_to_BC021076_5end | |association_with_transcript=117bp_to_BC021076_5end | ||
|cluster_id=chr11:2154041..2154052,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_4_at_BC021076_5end | |description=CAGE_peak_4_at_BC021076_5end | ||
|id=chr11:2154041..2154052,+ | |id=chr11:2154041..2154052,+ | ||
|ontology_enrichment_celltype=CL:0000244!3.21e-08!4;CL:0000731!3.21e-08!4;CL:0000349!7.89e-07!3;CL:0002577!7.89e-07!3 | |ontology_enrichment_celltype=CL:0000244!3.21e-08!4;CL:0000731!3.21e-08!4;CL:0000349!7.89e-07!3;CL:0002577!7.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.00e-37;19!CL:0002575;4.84e-14;2!CL:0002536;1.71e-13;2!CL:0002537;1.96e-11;5!CL:0002541;1.93e-09;3!CL:0002577;3.24e-09;3!CL:0000669;1.95e-07;4!CL:0000244;7.71e-07;4!CL:0000731;7.71e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.89e-37,19;CL:0002575,4.85e-14,2;CL:0002536,1.94e-13,2;CL:0002537,1.25e-11,5;CL:0002541,1.90e-09,3;CL:0002577,2.64e-09,3;CL:0000669,1.95e-07,4;CL:0000244,6.45e-07,4;CL:0000731,6.45e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.00e-07;1!UBERON:0004140;3.00e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.15e-15!14;UBERON:0000158!1.15e-15!14;UBERON:0000478!1.55e-13!24;UBERON:0003124!5.45e-10!7;UBERON:0001987!4.07e-08!4;UBERON:0004340!4.07e-08!4;UBERON:0000305!2.04e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!1.15e-15!14;UBERON:0000158!1.15e-15!14;UBERON:0000478!1.55e-13!24;UBERON:0003124!5.45e-10!7;UBERON:0001987!4.07e-08!4;UBERON:0004340!4.07e-08!4;UBERON:0000305!2.04e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.14e-34;24!UBERON:0005631;2.11e-29;10!UBERON:0000158;2.11e-29;10!UBERON:0000305;1.12e-21;7!UBERON:0003124;1.93e-09;3!UBERON:0000920;1.93e-09;3!UBERON:0002426;3.00e-07;1!UBERON:0003831;3.00e-07;1!UBERON:0003898;3.00e-07;1!UBERON:0004830;3.00e-07;1!UBERON:0003830;3.00e-07;1!UBERON:0005175;3.00e-07;1!UBERON:0001774;3.00e-07;1!UBERON:0001103;3.00e-07;1!UBERON:0001987;4.09e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,6.04e-35,24;UBERON:0005631,1.80e-34,14;UBERON:0000158,1.80e-34,14;UBERON:0000305,7.12e-22,7;UBERON:0004871,4.02e-19,8;UBERON:0003124,1.22e-14,7;UBERON:0000920,1.90e-09,3;UBERON:0004923,1.31e-07,66;UBERON:0002426,2.35e-07,1;UBERON:0003831,2.35e-07,1;UBERON:0003898,2.35e-07,1;UBERON:0004830,2.35e-07,1;UBERON:0003830,2.35e-07,1;UBERON:0005175,2.35e-07,1;UBERON:0001774,2.35e-07,1;UBERON:0001103,2.35e-07,1;UBERON:0010084,2.35e-07,1;UBERON:0001987,3.52e-07,4;UBERON:0004340,3.52e-07,4 | |||
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| ||
|short_description=p4@BC021076 | |short_description=p4@BC021076 | ||
}} | }} |
Latest revision as of 21:01, 23 July 2015
Short description: | p4@BC021076 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BC021076_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 117bp_to_BC021076_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.89e-37 | 19 |
central nervous system pericyte | 4.85e-14 | 2 |
amniotic epithelial cell | 1.94e-13 | 2 |
amnion mesenchymal stem cell | 1.25e-11 | 5 |
chorionic membrane mesenchymal stem cell | 1.90e-09 | 3 |
placental epithelial cell | 2.64e-09 | 3 |
pericyte cell | 1.95e-07 | 4 |
transitional epithelial cell | 6.45e-07 | 4 |
urothelial cell | 6.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 6.04e-35 | 24 |
extraembryonic membrane | 1.80e-34 | 14 |
membranous layer | 1.80e-34 | 14 |
amnion | 7.12e-22 | 7 |
somatic layer of lateral plate mesoderm | 4.02e-19 | 8 |
chorion | 1.22e-14 | 7 |
egg chorion | 1.90e-09 | 3 |
organ component layer | 1.31e-07 | 66 |
chest muscle | 2.35e-07 | 1 |
respiratory system muscle | 2.35e-07 | 1 |
skeletal muscle of trunk | 2.35e-07 | 1 |
respiratory system skeletal muscle | 2.35e-07 | 1 |
thoracic segment muscle | 2.35e-07 | 1 |
chest organ | 2.35e-07 | 1 |
muscle of trunk | 2.35e-07 | 1 |
diaphragm | 2.35e-07 | 1 |
future diaphragm | 2.35e-07 | 1 |
placenta | 3.52e-07 | 4 |
allantois | 3.52e-07 | 4 |