FFCP PHASE1:Hg19::chr11:2159572..2159583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-431bp_to_BC017277_5end | |association_with_transcript=-431bp_to_BC017277_5end | ||
|cluster_id=chr11:2159572..2159583,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_20_at_BC017277_5end | |description=CAGE_peak_20_at_BC017277_5end | ||
|id=chr11:2159572..2159583,+ | |id=chr11:2159572..2159583,+ | ||
|ontology_enrichment_celltype=CL:0002541!3.17e-12!3;CL:0002575!7.07e-09!2;CL:0002536!1.24e-08!2;CL:0002537!1.18e-07!5 | |ontology_enrichment_celltype=CL:0002541!3.17e-12!3;CL:0002575!7.07e-09!2;CL:0002536!1.24e-08!2;CL:0002537!1.18e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.97e-36;19!CL:0002575;2.56e-29;2!CL:0002537;3.62e-26;5!CL:0002541;3.48e-20;3!CL:0000669;3.42e-15;4!CL:0002536;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.77e-36,19;CL:0002575,2.96e-29,2;CL:0002537,3.32e-26,5;CL:0002541,3.01e-20,3;CL:0000669,3.67e-15,4;CL:0002536,2.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.93e-16;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.22e-25!14;UBERON:0000158!1.22e-25!14;UBERON:0000478!3.86e-24!24;UBERON:0000305!9.00e-14!7;UBERON:0003124!1.59e-13!7;UBERON:0000476!3.17e-12!3;UBERON:0000920!3.17e-12!3;UBERON:0004871!5.29e-12!8;UBERON:0004923!5.83e-07!57 | |ontology_enrichment_uberon=UBERON:0005631!1.22e-25!14;UBERON:0000158!1.22e-25!14;UBERON:0000478!3.86e-24!24;UBERON:0000305!9.00e-14!7;UBERON:0003124!1.59e-13!7;UBERON:0000476!3.17e-12!3;UBERON:0000920!3.17e-12!3;UBERON:0004871!5.29e-12!8;UBERON:0004923!5.83e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.10e-50;10!UBERON:0000158;1.10e-50;10!UBERON:0000478;3.00e-37;24!UBERON:0000305;1.58e-32;7!UBERON:0003124;3.48e-20;3!UBERON:0000920;3.48e-20;3!UBERON:0004923;1.31e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.74e-49,14;UBERON:0000158,3.74e-49,14;UBERON:0000478,2.80e-37,24;UBERON:0000305,1.58e-32,7;UBERON:0004871,1.60e-28,8;UBERON:0000920,3.01e-20,3;UBERON:0003124,3.63e-19,7;UBERON:0004923,4.29e-13,66 | |||
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| ||
|short_description=p20@BC017277 | |short_description=p20@BC017277 | ||
}} | }} |
Latest revision as of 21:02, 23 July 2015
Short description: | p20@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -431bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.77e-36 | 19 |
central nervous system pericyte | 2.96e-29 | 2 |
amnion mesenchymal stem cell | 3.32e-26 | 5 |
chorionic membrane mesenchymal stem cell | 3.01e-20 | 3 |
pericyte cell | 3.67e-15 | 4 |
amniotic epithelial cell | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.74e-49 | 14 |
membranous layer | 3.74e-49 | 14 |
extraembryonic structure | 2.80e-37 | 24 |
amnion | 1.58e-32 | 7 |
somatic layer of lateral plate mesoderm | 1.60e-28 | 8 |
egg chorion | 3.01e-20 | 3 |
chorion | 3.63e-19 | 7 |
organ component layer | 4.29e-13 | 66 |