FFCP PHASE1:Hg19::chr11:2160098..2160115,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=83bp_to_BC017277_5end | |association_with_transcript=83bp_to_BC017277_5end | ||
|cluster_id=chr11:2160098..2160115,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_4_at_BC017277_5end | |description=CAGE_peak_4_at_BC017277_5end | ||
|id=chr11:2160098..2160115,+ | |id=chr11:2160098..2160115,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.41e-23;19!CL:0002541;1.30e-09;3!CL:0002577;1.34e-09;3!CL:0002575;3.99e-07;2!CL:0000669;5.50e-07;4!CL:0002536;5.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.33e-23,19;CL:0002541,1.23e-09,3;CL:0002577,1.30e-09,3;CL:0002575,4.05e-07,2;CL:0002536,5.74e-07,2;CL:0000669,6.41e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.23e-12!14;UBERON:0000158!2.23e-12!14;UBERON:0003124!1.87e-09!7;UBERON:0000478!2.15e-09!24;UBERON:0000481!1.33e-08!347;UBERON:0007023!1.87e-07!115;UBERON:0004119!2.33e-07!169;UBERON:0000925!2.33e-07!169;UBERON:0006595!2.33e-07!169 | |ontology_enrichment_uberon=UBERON:0005631!2.23e-12!14;UBERON:0000158!2.23e-12!14;UBERON:0003124!1.87e-09!7;UBERON:0000478!2.15e-09!24;UBERON:0000481!1.33e-08!347;UBERON:0007023!1.87e-07!115;UBERON:0004119!2.33e-07!169;UBERON:0000925!2.33e-07!169;UBERON:0006595!2.33e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.66e-24;24!UBERON:0005631;3.26e-18;10!UBERON:0000158;3.26e-18;10!UBERON:0001987;3.19e-12;4!UBERON:0000305;8.85e-11;7!UBERON:0000922;2.61e-10;49!UBERON:0003124;1.30e-09;3!UBERON:0000920;1.30e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.75e-28,14;UBERON:0000158,1.75e-28,14;UBERON:0000478,2.49e-24,24;UBERON:0003124,3.67e-20,7;UBERON:0001987,3.06e-12,4;UBERON:0004340,3.06e-12,4;UBERON:0000305,8.77e-11,7;UBERON:0000920,1.23e-09,3;UBERON:0004871,2.24e-09,8 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,0,15.7277787933724,18.9912224324487,0.247532705920093,1.32558950291166,0,0,0,0,0.123121058076788,1.02000345622126,0.313454721478088,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0.486634870302636,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8757911252537,6.91411109375999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.600952235626387,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.69716365721711,0.621966330092223,0.252320850875628,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,8.24022538238861,0,0,0,0,0.277765335475589,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1798003441664,0,0,0,0,0,0,0.514414748524284,0,0,0.428933980974443,24.4179722426149,0,0,0.355391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0,0.234282829985426,0.300946099727719,0,3.10419213877515,0,0.368738337083406,0,18.4053088014976,37.0594897715724,0,0,0,8.48757200049526,9.98612637062982,52.6159110393644,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,8.82273982018842,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0.431831832204279,1.54227252690289,0.541892875087706,1.00337954770971,0,0,0,0,0.261435451024901,0,0,0,3.19427136107939,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.827019434907183,0,0.725083469571143,0.681813019328807,4.36256974669013,0,0.768760269460425,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0,0.855877976067841,0,0,0.719489830333259,0.274537029736055,0.353437207037059,0,0,0,0.975267478179181,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.785992328104969,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,3.48332062874083,0.86101074534246,1.68471475667626,2.21715076768338,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,52.0462976728164,22.8662804241132,52.5244800589687,0,0,0,0,1.47787785689595,0.796991953004279,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,4.38071418337314,0,0,54.2301971544263,2.74792780205587,92.2150162512238,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0.995261931078505,0.0884575645033392,2.4441205797345,0,0,0,0.067401132980677,34.5108388338479,0.234264445725339,0,0,0,0,24.1981432097328,0.30607276163049,0.568679216656392,0,0,0.664653872707185,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,7.00540296419651,0,0,0.189932387867636,0.195551382734803,0,0,1.79828648623917,0,0,16.3015247968866,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.998395002494955,0.429226048136571,0,4.70284307407084,0.360299883542404,0,18.2776982952759,17.7194095519508,19.8166418931304,7.18520615057666,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,2.7800931711549,0,0,0,5.71756261098694,1.98627591109629,0,0,0,0,0,0,0,0.113312091520126,0,63.6033066778662,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,1.86623178009892,0,0,0,0.327628914576042,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0.159633859057151,0,0.504143392443436,0.0691572524642179,0,0,0,0,0,0,0,0,0.795664888465099,0.902523940191087,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.227662191351298,16.4986408502508,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,2.5224494698241,7.30526976407596,0,0,1.78691360441641,0,0,14.6040948734167,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0.731507549893617,0,0.410651227424988,89.3057112130413,3.88568794447312,0,6.56537558032515,0,0,0,0,0.0771741581079447,4.80831033108706,0,0.490296643507811,0.235676547101626,0.196308467114945,0,2.113278637917,0,0,0.966868319603658,0,0,0,0,6.57302749421866,0,0,0.631086248772738,0,0.872701380680755,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0.803892390468535,0,0.103432995861895,0,27.1393451868664,0,0.682821857254437,0,0.12729431655633,6.66986723562124,0.653150243690884,103.69669022884,0.0673520530145875,0.215166616178029,14.3043953314786,0.814032686109745,0,0,0.269475606319761,18.7712753922763,0.122241444182866,6.91723503136755,0.665756774185513,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,0,15.7277787933724,18.9912224324487,0.247532705920093,1.32558950291166,0,0,0,0,0.123121058076788,1.02000345622126,0.313454721478088,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0.486634870302636,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8757911252537,6.91411109375999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.600952235626387,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.69716365721711,0.621966330092223,0.252320850875628,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,8.24022538238861,0,0,0,0,0.277765335475589,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1798003441664,0,0,0,0,0,0,0.514414748524284,0,0,0.428933980974443,24.4179722426149,0,0,0.355391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0,0.234282829985426,0.300946099727719,0,3.10419213877515,0,0.368738337083406,0,18.4053088014976,37.0594897715724,0,0,0,8.48757200049526,9.98612637062982,52.6159110393644,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,8.82273982018842,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0.431831832204279,1.54227252690289,0.541892875087706,1.00337954770971,0,0,0,0,0.261435451024901,0,0,0,3.19427136107939,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.827019434907183,0,0.725083469571143,0.681813019328807,4.36256974669013,0,0.768760269460425,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0,0.855877976067841,0,0,0.719489830333259,0.274537029736055,0.353437207037059,0,0,0,0.975267478179181,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.785992328104969,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,3.48332062874083,0.86101074534246,1.68471475667626,2.21715076768338,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,52.0462976728164,22.8662804241132,52.5244800589687,0,0,0,0,1.47787785689595,0.796991953004279,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,4.38071418337314,0,0,54.2301971544263,2.74792780205587,92.2150162512238,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0.995261931078505,0.0884575645033392,2.4441205797345,0,0,0,0.067401132980677,34.5108388338479,0.234264445725339,0,0,0,0,24.1981432097328,0.30607276163049,0.568679216656392,0,0,0.664653872707185,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,7.00540296419651,0,0,0.189932387867636,0.195551382734803,0,0,1.79828648623917,0,0,16.3015247968866,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.998395002494955,0.429226048136571,0,4.70284307407084,0.360299883542404,0,18.2776982952759,17.7194095519508,19.8166418931304,7.18520615057666,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,2.7800931711549,0,0,0,5.71756261098694,1.98627591109629,0,0,0,0,0,0,0,0.113312091520126,0,63.6033066778662,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,1.86623178009892,0,0,0,0.327628914576042,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0.159633859057151,0,0.504143392443436,0.0691572524642179,0,0,0,0,0,0,0,0,0.795664888465099,0.902523940191087,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.227662191351298,16.4986408502508,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,2.5224494698241,7.30526976407596,0,0,1.78691360441641,0,0,14.6040948734167,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0.731507549893617,0,0.410651227424988,89.3057112130413,3.88568794447312,0,6.56537558032515,0,0,0,0,0.0771741581079447,4.80831033108706,0,0.490296643507811,0.235676547101626,0.196308467114945,0,2.113278637917,0,0,0.966868319603658,0,0,0,0,6.57302749421866,0,0,0.631086248772738,0,0.872701380680755,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0.803892390468535,0,0.103432995861895,0,27.1393451868664,0,0.682821857254437,0,0.12729431655633,6.66986723562124,0.653150243690884,103.69669022884,0.0673520530145875,0.215166616178029,14.3043953314786,0.814032686109745,0,0,0.269475606319761,18.7712753922763,0.122241444182866,6.91723503136755,0.665756774185513,0.201273793591026,0 | ||
|short_description=p4@BC017277 | |short_description=p4@BC017277 | ||
}} | }} |
Latest revision as of 21:03, 23 July 2015
Short description: | p4@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 83bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.33e-23 | 19 |
chorionic membrane mesenchymal stem cell | 1.23e-09 | 3 |
placental epithelial cell | 1.30e-09 | 3 |
central nervous system pericyte | 4.05e-07 | 2 |
amniotic epithelial cell | 5.74e-07 | 2 |
pericyte cell | 6.41e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.75e-28 | 14 |
membranous layer | 1.75e-28 | 14 |
extraembryonic structure | 2.49e-24 | 24 |
chorion | 3.67e-20 | 7 |
placenta | 3.06e-12 | 4 |
allantois | 3.06e-12 | 4 |
amnion | 8.77e-11 | 7 |
egg chorion | 1.23e-09 | 3 |
somatic layer of lateral plate mesoderm | 2.24e-09 | 8 |