FFCP PHASE1:Hg19::chr11:31825194..31825209,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=entrezgene:5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8620 | |HGNC=HGNC:8620 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000530714_5end | |association_with_transcript=11bp_to_ENST00000530714_5end | ||
|cluster_id=chr11:31825194..31825209,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_17_at_PAX6_5end | |description=CAGE_peak_17_at_PAX6_5end |
Revision as of 21:30, 23 July 2015
Short description: | p17@PAX6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PAX6_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 11bp_to_ENST00000530714_5end |
EntrezGene: | 5080 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p17@PAX6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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ciliated cell | 6.50e-20 | 3 |
ciliated epithelial cell | 6.50e-20 | 3 |
multi-ciliated epithelial cell | 6.50e-20 | 3 |
non-pigmented ciliary epithelial cell | 6.50e-20 | 3 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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pineal body | 1.92e-29 | 2 |
regional part of epithalamus | 1.92e-29 | 2 |
secretory circumventricular organ | 1.92e-29 | 2 |
circumventricular organ | 1.92e-29 | 2 |
epithalamus | 1.92e-29 | 2 |
cerebellum | 2.12e-22 | 6 |
rhombic lip | 2.12e-22 | 6 |
pigment epithelium of eye | 9.50e-21 | 11 |
ciliary epithelium | 6.50e-20 | 3 |
ciliary body | 6.50e-20 | 3 |
Showing 1 to 10 of 66 entries