FFCP PHASE1:Hg19::chr11:618933..618946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:618933..618946,+ | |||
|coexpression_cluster_id=C124 | |coexpression_cluster_id=C124 | ||
|description=CAGE_peak_at_chr11:618933..618946,+ | |description=CAGE_peak_at_chr11:618933..618946,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.57e-09;4 | |ontology_enrichment_celltype_v019=CL:0002563;1.57e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.44e-09,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.31e-19!27;UBERON:0001155!6.01e-16!9;UBERON:0005409!7.78e-15!35;UBERON:0000059!4.36e-13!11;UBERON:0001154!4.44e-10!1;UBERON:0001153!4.44e-10!1 | |ontology_enrichment_uberon=UBERON:0000160!2.31e-19!27;UBERON:0001155!6.01e-16!9;UBERON:0005409!7.78e-15!35;UBERON:0000059!4.36e-13!11;UBERON:0001154!4.44e-10!1;UBERON:0001153!4.44e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.22e-59;4!UBERON:0000160;7.63e-46;17!UBERON:0005409;4.83e-36;22!UBERON:0004921;3.00e-21;33!UBERON:0002114;2.89e-12;2!UBERON:0001555;3.10e-10;54!UBERON:0001242;1.57e-09;4!UBERON:0001262;1.57e-09;4!UBERON:0004786;1.57e-09;4!UBERON:0004808;1.57e-09;4!UBERON:0001277;1.57e-09;4!UBERON:0001007;1.88e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0002108;1.22e-59;4!UBERON:0000160;7.63e-46;17!UBERON:0005409;4.83e-36;22!UBERON:0004921;3.00e-21;33!UBERON:0002114;2.89e-12;2!UBERON:0001555;3.10e-10;54!UBERON:0001242;1.57e-09;4!UBERON:0001262;1.57e-09;4!UBERON:0004786;1.57e-09;4!UBERON:0004808;1.57e-09;4!UBERON:0001277;1.57e-09;4!UBERON:0001007;1.88e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.35e-59,4;UBERON:0000160,7.29e-46,17;UBERON:0005409,5.58e-32,25;UBERON:0002114,3.24e-12,2;UBERON:0001242,1.44e-09,4;UBERON:0001262,1.44e-09,4;UBERON:0004786,1.44e-09,4;UBERON:0004808,1.44e-09,4;UBERON:0001277,1.44e-09,4;UBERON:0004921,2.32e-07,118 | |||
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|short_description=p@chr11:618933..618946,+ | |short_description=p@chr11:618933..618946,+ | ||
}} | }} |
Latest revision as of 23:37, 23 July 2015
Short description: | p@chr11:618933..618946, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:618933..618946, + |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.35e-59 | 4 |
intestine | 7.29e-46 | 17 |
gastrointestinal system | 5.58e-32 | 25 |
duodenum | 3.24e-12 | 2 |
intestinal mucosa | 1.44e-09 | 4 |
wall of intestine | 1.44e-09 | 4 |
gastrointestinal system mucosa | 1.44e-09 | 4 |
gastrointestinal system epithelium | 1.44e-09 | 4 |
intestinal epithelium | 1.44e-09 | 4 |
subdivision of digestive tract | 2.32e-07 | 118 |