FFCP PHASE1:Hg19::chr11:76495636..76495651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:76495636..76495651,- | |||
|description=CAGE_peak_at_chr11:76495636..76495651,- | |description=CAGE_peak_at_chr11:76495636..76495651,- | ||
|id=chr11:76495636..76495651,- | |id=chr11:76495636..76495651,- | ||
|ontology_enrichment_celltype=CL:0002076!3.91e-14!43;CL:0000223!4.30e-13!59;CL:0000066!6.35e-11!254;CL:0002368!1.19e-09!13;CL:0002251!8.25e-07!21 | |ontology_enrichment_celltype=CL:0002076!3.91e-14!43;CL:0000223!4.30e-13!59;CL:0000066!6.35e-11!254;CL:0002368!1.19e-09!13;CL:0002251!8.25e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002328;8.74e-18;3!CL:0002591;9.12e-14;1!CL:0002202;3.73e-13;9!CL:0002632;3.73e-13;9!CL:0002368;2.79e-09;13!CL:0002535;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,8.40e-18,3;CL:0002591,7.55e-14,1;CL:0002202,3.74e-13,9;CL:0002632,3.74e-13,9;CL:0002368,2.80e-09,13;CL:0002535,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.86e-11!14;DOID:305!6.96e-11!106;DOID:0050687!6.71e-08!143;DOID:120!3.04e-07!27 | |ontology_enrichment_disease=DOID:1749!3.86e-11!14;DOID:305!6.96e-11!106;DOID:0050687!6.71e-08!143;DOID:120!3.04e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:4074;1.59e-07;2!DOID:4905;1.59e-07;2!DOID:3498;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.28e-07,2;DOID:4905,1.28e-07,2;DOID:3498,1.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!7.55e-08!72;UBERON:0000344!3.22e-07!12;UBERON:0004119!5.57e-07!169;UBERON:0000925!5.57e-07!169;UBERON:0006595!5.57e-07!169;UBERON:0000065!7.02e-07!53;UBERON:0000992!7.11e-07!13 | |ontology_enrichment_uberon=UBERON:0001004!7.55e-08!72;UBERON:0000344!3.22e-07!12;UBERON:0004119!5.57e-07!169;UBERON:0000925!5.57e-07!169;UBERON:0006595!5.57e-07!169;UBERON:0000065!7.02e-07!53;UBERON:0000992!7.11e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.74e-18;3!UBERON:0002031;8.74e-18;3!UBERON:0002185;4.66e-11;5!UBERON:0000485;3.77e-08;7!UBERON:0007196;4.11e-08;15!UBERON:0001558;4.11e-08;15!UBERON:0000078;1.59e-07;2!UBERON:0006955;1.59e-07;2!UBERON:0004801;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0008886;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,8.40e-18,3;UBERON:0002031,8.40e-18,3;UBERON:0000485,3.44e-13,9;UBERON:0002185,4.55e-11,5;UBERON:0007196,4.12e-08,15;UBERON:0001558,4.12e-08,15;UBERON:0000078,1.45e-07,2;UBERON:0007497,1.45e-07,2;UBERON:0003643,1.45e-07,2;UBERON:0003504,1.45e-07,2;UBERON:0003469,1.45e-07,2;UBERON:0003496,1.45e-07,2;UBERON:0002012,1.45e-07,2;UBERON:0008886,1.45e-07,2;UBERON:0007303,1.45e-07,2;UBERON:0002061,1.45e-07,2;UBERON:0005432,1.45e-07,2;UBERON:0004363,1.45e-07,2;UBERON:0004807,1.98e-07,28;UBERON:0006955,2.12e-07,2;UBERON:0004801,2.12e-07,2 | |||
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| ||
|short_description=p@chr11:76495636..76495651,- | |short_description=p@chr11:76495636..76495651,- | ||
}} | }} |
Latest revision as of 02:41, 24 July 2015
Short description: | p@chr11:76495636..76495651, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:76495636..76495651, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 8.40e-18 | 3 |
smooth muscle cell of the pulmonary artery | 7.55e-14 | 1 |
epithelial cell of tracheobronchial tree | 3.74e-13 | 9 |
epithelial cell of lower respiratory tract | 3.74e-13 | 9 |
respiratory epithelial cell | 2.80e-09 | 13 |
epithelial cell of cervix | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 8.40e-18 | 3 |
epithelium of bronchus | 8.40e-18 | 3 |
simple columnar epithelium | 3.44e-13 | 9 |
bronchus | 4.55e-11 | 5 |
tracheobronchial tree | 4.12e-08 | 15 |
lower respiratory tract | 4.12e-08 | 15 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.45e-07 | 2 |
developing epithelial placode | 1.45e-07 | 2 |
respiratory system arterial blood vessel | 1.45e-07 | 2 |
respiratory system blood vessel | 1.45e-07 | 2 |
respiratory system artery | 1.45e-07 | 2 |
head blood vessel | 1.45e-07 | 2 |
pulmonary artery | 1.45e-07 | 2 |
pulmonary vascular system | 1.45e-07 | 2 |
pharyngeal vasculature | 1.45e-07 | 2 |
truncus arteriosus | 1.45e-07 | 2 |
aortic sac | 1.45e-07 | 2 |
pharyngeal arch artery | 1.45e-07 | 2 |
respiratory system epithelium | 1.98e-07 | 28 |
uterine epithelium | 2.12e-07 | 2 |
cervix epithelium | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.28e-07 | 2 |
pancreatic carcinoma | 1.28e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.28e-07 | 2 |