FFCP PHASE1:Hg19::chr11:76495636..76495651,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:76495636..76495651,-
|short_description=p@chr11:76495636..76495651,-
|description=CAGE_peak_at_chr11:76495636..76495651,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:76495636..76495651,- | |||
|description=CAGE_peak_at_chr11:76495636..76495651,- | |||
|id=chr11:76495636..76495651,- | |||
|ontology_enrichment_celltype=CL:0002076!3.91e-14!43;CL:0000223!4.30e-13!59;CL:0000066!6.35e-11!254;CL:0002368!1.19e-09!13;CL:0002251!8.25e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002328;8.74e-18;3!CL:0002591;9.12e-14;1!CL:0002202;3.73e-13;9!CL:0002632;3.73e-13;9!CL:0002368;2.79e-09;13!CL:0002535;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,8.40e-18,3;CL:0002591,7.55e-14,1;CL:0002202,3.74e-13,9;CL:0002632,3.74e-13,9;CL:0002368,2.80e-09,13;CL:0002535,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.86e-11!14;DOID:305!6.96e-11!106;DOID:0050687!6.71e-08!143;DOID:120!3.04e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.59e-07;2!DOID:4905;1.59e-07;2!DOID:3498;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.28e-07,2;DOID:4905,1.28e-07,2;DOID:3498,1.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!7.55e-08!72;UBERON:0000344!3.22e-07!12;UBERON:0004119!5.57e-07!169;UBERON:0000925!5.57e-07!169;UBERON:0006595!5.57e-07!169;UBERON:0000065!7.02e-07!53;UBERON:0000992!7.11e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.74e-18;3!UBERON:0002031;8.74e-18;3!UBERON:0002185;4.66e-11;5!UBERON:0000485;3.77e-08;7!UBERON:0007196;4.11e-08;15!UBERON:0001558;4.11e-08;15!UBERON:0000078;1.59e-07;2!UBERON:0006955;1.59e-07;2!UBERON:0004801;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0008886;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,8.40e-18,3;UBERON:0002031,8.40e-18,3;UBERON:0000485,3.44e-13,9;UBERON:0002185,4.55e-11,5;UBERON:0007196,4.12e-08,15;UBERON:0001558,4.12e-08,15;UBERON:0000078,1.45e-07,2;UBERON:0007497,1.45e-07,2;UBERON:0003643,1.45e-07,2;UBERON:0003504,1.45e-07,2;UBERON:0003469,1.45e-07,2;UBERON:0003496,1.45e-07,2;UBERON:0002012,1.45e-07,2;UBERON:0008886,1.45e-07,2;UBERON:0007303,1.45e-07,2;UBERON:0002061,1.45e-07,2;UBERON:0005432,1.45e-07,2;UBERON:0004363,1.45e-07,2;UBERON:0004807,1.98e-07,28;UBERON:0006955,2.12e-07,2;UBERON:0004801,2.12e-07,2 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0.545492241181669,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,3.37205259772859,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.425325291727159,0,0.290633938513962,1.53353071666084,0,0,0.414656231081544,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.576570202095319,0.127612712494584,0.6069466851333,0,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0,1.13008116620243,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0.405820753925408,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.1137934482855,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0.108647371922008,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0.442287822516696,0,0.593042257361244,0.123563938946503,0.313265848516366,0,0,0,0,1.36965233252463,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,1.04471047896483,0.17472666824203,0,0.19351266257817,0.0730893170861856,0,0.581934098930517,0,0,0.137041924646751,0,0,0.391102765469606,0.240476460754601,0,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0.35857467866569,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0.612691153526923,0,0,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,0,0.686520205190771,0.302461847526478,0.932623203496683,0.147855149989634,0.159296767163702,0,0.310525913752519,1.65882483136342,0,0,0.150257608997218,0.380805212168795,0,0.545545977607678,0.751873899297419,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0.245772908753719,0.211312123358627,0.39997479170986,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.490738592505128,0.471878893390961,0.366857197043358,0.808679663052368,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0.227662191351298,0.0887023701626388,0,0.342976018874837,0,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0.6828739083758,0,0,0,0,0,0.4582137370881,0.62041277132864,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0.67767649223376,0,0,1.389134845943,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,1.05868461514708,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.202056159043763,0,0,0.325613074443898,0,0,0.179650404213174,0,0,0,0,0,0 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| ||
|short_description=p@chr11:76495636..76495651,- | |||
}} | }} |
Latest revision as of 02:41, 24 July 2015
Short description: | p@chr11:76495636..76495651, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:76495636..76495651, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 8.40e-18 | 3 |
smooth muscle cell of the pulmonary artery | 7.55e-14 | 1 |
epithelial cell of tracheobronchial tree | 3.74e-13 | 9 |
epithelial cell of lower respiratory tract | 3.74e-13 | 9 |
respiratory epithelial cell | 2.80e-09 | 13 |
epithelial cell of cervix | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 8.40e-18 | 3 |
epithelium of bronchus | 8.40e-18 | 3 |
simple columnar epithelium | 3.44e-13 | 9 |
bronchus | 4.55e-11 | 5 |
tracheobronchial tree | 4.12e-08 | 15 |
lower respiratory tract | 4.12e-08 | 15 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.45e-07 | 2 |
developing epithelial placode | 1.45e-07 | 2 |
respiratory system arterial blood vessel | 1.45e-07 | 2 |
respiratory system blood vessel | 1.45e-07 | 2 |
respiratory system artery | 1.45e-07 | 2 |
head blood vessel | 1.45e-07 | 2 |
pulmonary artery | 1.45e-07 | 2 |
pulmonary vascular system | 1.45e-07 | 2 |
pharyngeal vasculature | 1.45e-07 | 2 |
truncus arteriosus | 1.45e-07 | 2 |
aortic sac | 1.45e-07 | 2 |
pharyngeal arch artery | 1.45e-07 | 2 |
respiratory system epithelium | 1.98e-07 | 28 |
uterine epithelium | 2.12e-07 | 2 |
cervix epithelium | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.28e-07 | 2 |
pancreatic carcinoma | 1.28e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.28e-07 | 2 |