FFCP PHASE1:Hg19::chr11:88911848..88911856,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:88911848..88911856,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr11:88911848..88911856,+ | |||
|id=chr11:88911848..88911856,+ | |||
|ontology_enrichment_celltype=CL:0000148!7.91e-79!10;CL:0000541!7.91e-79!10;CL:0000147!2.04e-56!14;CL:0000710!1.38e-39!20;CL:0002567!2.30e-30!3;CL:0000075!2.19e-29!27;CL:0002077!4.46e-24!33;CL:0002566!1.34e-23!1;CL:0000325!2.14e-20!39;CL:0000333!1.65e-18!41;CL:0000133!4.58e-13!59;CL:0000221!6.43e-11!71;CL:0000149!7.70e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.34e-63;10!CL:0000147;1.48e-45;14!CL:0002566;1.81e-40;1!CL:0000710;3.53e-32;20!CL:0000075;4.54e-24;27!CL:0002077;4.94e-19;34!CL:0002567;1.22e-14;3!CL:0000149;3.26e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.53e-63,10;CL:0000541,2.53e-63,10;CL:0000147,1.57e-45,14;CL:0002566,9.91e-41,1;CL:0000710,3.67e-32,20;CL:0000075,4.68e-24,27;CL:0002077,2.82e-19,34;CL:0000333,2.10e-15,41;CL:0002567,1.22e-14,3;CL:0000149,3.42e-11,4;CL:0000133,4.53e-11,59;CL:0000221,3.07e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.22e-44!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.66e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001003!3.04e-07!14;UBERON:0007376!3.04e-07!14;UBERON:0007383!3.04e-07!14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8414389344729,0.381988425558278,2.34434894420094,0,0.616964956219941,1.50171528921959,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:88911848..88911856,+ | |||
}} |
Latest revision as of 03:24, 24 July 2015
Short description: | p@chr11:88911848..88911856, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:88911848..88911856, + |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.53e-63 | 10 |
melanoblast | 2.53e-63 | 10 |
pigment cell | 1.57e-45 | 14 |
dark melanocyte | 9.91e-41 | 1 |
neurecto-epithelial cell | 3.67e-32 | 20 |
columnar/cuboidal epithelial cell | 4.68e-24 | 27 |
ecto-epithelial cell | 2.82e-19 | 34 |
migratory neural crest cell | 2.10e-15 | 41 |
light melanocyte | 1.22e-14 | 3 |
visual pigment cell | 3.42e-11 | 4 |
neurectodermal cell | 4.53e-11 | 59 |
ectodermal cell | 3.07e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.66e-21 | 2 |