FFCP PHASE1:Hg19::chr12:11000992..11001011,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:11000992..11001011,- | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_at_chr12:11000992..11001011,- | |||
|id=chr12:11000992..11001011,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.28e-23;1!UBERON:0008801;5.73e-23;1!UBERON:0006965;2.07e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.00e-16!115;UBERON:0003127!3.83e-10!2;UBERON:0001829!5.44e-10!2;UBERON:0000341!9.96e-10!2;UBERON:0001950!2.24e-08!20;UBERON:0002619!1.44e-07!22;UBERON:0001044!2.67e-07!6;UBERON:0003293!2.67e-07!6;UBERON:0003294!2.67e-07!6;UBERON:0010047!2.67e-07!6;UBERON:0000167!2.67e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.00e-45;2!UBERON:0001829;2.67e-44;2!UBERON:0001044;1.94e-33;6!UBERON:0003293;1.94e-33;6!UBERON:0003294;1.94e-33;6!UBERON:0010047;1.94e-33;6!UBERON:0003408;1.94e-33;6!UBERON:0000167;1.94e-33;6!UBERON:0001736;3.28e-23;1!UBERON:0001831;5.73e-23;1!UBERON:0001567;5.73e-23;1!UBERON:0001041;8.66e-15;14!UBERON:0003126;1.15e-13;7!UBERON:0001005;1.15e-13;7!UBERON:0000341;1.48e-12;2!UBERON:0004089;3.43e-12;2!UBERON:0000161;4.44e-11;19!UBERON:0000166;4.44e-11;19!UBERON:0000165;1.02e-07;28!UBERON:0002365;6.80e-07;31!UBERON:0002330;6.80e-07;31!UBERON:0007196;7.20e-07;15!UBERON:0001558;7.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.00e-45,2;UBERON:0001829,2.98e-44,2;UBERON:0001044,2.05e-33,6;UBERON:0003293,2.05e-33,6;UBERON:0003294,2.05e-33,6;UBERON:0010047,2.05e-33,6;UBERON:0000167,2.05e-33,6;UBERON:0001736,3.28e-23,1;UBERON:0006298,3.28e-23,1;UBERON:0001831,6.40e-23,1;UBERON:0001567,6.40e-23,1;UBERON:0008801,6.40e-23,1;UBERON:0003408,2.18e-20,10;UBERON:0003126,1.15e-13,7;UBERON:0001005,1.15e-13,7;UBERON:0000341,1.48e-12,2;UBERON:0004089,3.62e-12,2;UBERON:0000166,1.19e-09,22;UBERON:0001004,1.29e-07,74;UBERON:0000165,1.82e-07,29;UBERON:0000930,1.82e-07,29;UBERON:0002365,5.08e-07,31;UBERON:0002330,5.08e-07,31;UBERON:0007023,5.78e-07,114;UBERON:0007196,7.20e-07,15;UBERON:0001558,7.20e-07,15 | |||
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|short_description=p@chr12:11000992..11001011,- | |||
}} |
Latest revision as of 04:47, 24 July 2015
Short description: | p@chr12:11000992..11001011, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:11000992..11001011, - |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 5.00e-45 | 2 |
major salivary gland | 2.98e-44 | 2 |
saliva-secreting gland | 2.05e-33 | 6 |
gland of oral region | 2.05e-33 | 6 |
gland of foregut | 2.05e-33 | 6 |
oral gland | 2.05e-33 | 6 |
oral cavity | 2.05e-33 | 6 |
submandibular gland | 3.28e-23 | 1 |
submandibular gland primordium | 3.28e-23 | 1 |
parotid gland | 6.40e-23 | 1 |
cheek | 6.40e-23 | 1 |
parotid gland primordium | 6.40e-23 | 1 |
gland of gut | 2.18e-20 | 10 |
trachea | 1.15e-13 | 7 |
respiratory airway | 1.15e-13 | 7 |
throat | 1.48e-12 | 2 |
midface | 3.62e-12 | 2 |
oral opening | 1.19e-09 | 22 |
respiratory system | 1.29e-07 | 74 |
mouth | 1.82e-07 | 29 |
stomodeum | 1.82e-07 | 29 |
exocrine gland | 5.08e-07 | 31 |
exocrine system | 5.08e-07 | 31 |
adult organism | 5.78e-07 | 114 |
tracheobronchial tree | 7.20e-07 | 15 |
lower respiratory tract | 7.20e-07 | 15 |