FFCP PHASE1:Hg19::chr12:117256221..117256231,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:117256221..117256231,+ | |||
|coexpression_cluster_id=C138 | |coexpression_cluster_id=C138 | ||
|description=CAGE_peak_at_chr12:117256221..117256231,+ | |description=CAGE_peak_at_chr12:117256221..117256231,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000817!1.62e-07!3;CL:0000945!8.55e-07!24;CL:0000826!8.55e-07!24 | |ontology_enrichment_celltype=CL:0000817!1.62e-07!3;CL:0000945!8.55e-07!24;CL:0000826!8.55e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000785;5.42e-195;1!CL:0000819;5.42e-195;1!CL:0000236;1.21e-16;13!CL:0000945;1.01e-09;24 | |ontology_enrichment_celltype_v019=CL:0000785;5.42e-195;1!CL:0000819;5.42e-195;1!CL:0000236;1.21e-16;13!CL:0000945;1.01e-09;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,5.42e-195,1;CL:0000785,1.55e-98,2;CL:0000955,1.55e-98,2;CL:0000818,1.55e-98,2;CL:0000954,1.55e-98,2;CL:0000816,1.55e-98,2;CL:0000817,2.39e-66,3;CL:0000236,1.43e-15,14;CL:0000945,1.01e-09,24;CL:0000826,1.01e-09,24 | |||
|ontology_enrichment_development_v019=CL:0000954;1.55e-98;2 | |ontology_enrichment_development_v019=CL:0000954;1.55e-98;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;5.42e-195;1!DOID:8675;5.42e-195;1!DOID:0060058;3.81e-21;10 | |ontology_enrichment_disease_v019=DOID:0060073;5.42e-195;1!DOID:8675;5.42e-195;1!DOID:0060058;3.81e-21;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.42e-195,1;DOID:8675,5.42e-195,1;DOID:0060058,3.81e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.68e-18!57;UBERON:0005068!3.68e-18!57;UBERON:0006241!3.68e-18!57;UBERON:0007135!3.68e-18!57;UBERON:0002616!1.99e-17!59;UBERON:0001893!1.02e-15!34;UBERON:0007023!1.75e-15!115;UBERON:0002780!3.63e-15!41;UBERON:0001890!3.63e-15!41;UBERON:0006240!3.63e-15!41;UBERON:0003080!9.45e-15!42;UBERON:0000955!3.83e-14!69;UBERON:0006238!3.83e-14!69;UBERON:0001869!4.19e-14!32;UBERON:0002791!1.28e-13!33;UBERON:0002020!3.15e-13!34;UBERON:0003528!3.15e-13!34;UBERON:0000153!1.50e-11!129;UBERON:0007811!1.50e-11!129;UBERON:0001017!2.22e-11!82;UBERON:0003075!7.32e-11!86;UBERON:0007284!7.32e-11!86;UBERON:0005743!1.07e-10!86;UBERON:0002346!3.18e-10!90;UBERON:0000033!8.99e-10!123;UBERON:0003056!2.05e-09!61;UBERON:0000073!2.28e-09!94;UBERON:0001016!2.28e-09!94;UBERON:0002619!1.92e-08!22;UBERON:0002308!2.09e-08!9;UBERON:0000125!2.09e-08!9;UBERON:0003408!7.56e-08!10;UBERON:0000956!2.28e-07!25;UBERON:0000203!2.28e-07!25;UBERON:0001950!6.31e-07!20;UBERON:0000988!8.80e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!3.68e-18!57;UBERON:0005068!3.68e-18!57;UBERON:0006241!3.68e-18!57;UBERON:0007135!3.68e-18!57;UBERON:0002616!1.99e-17!59;UBERON:0001893!1.02e-15!34;UBERON:0007023!1.75e-15!115;UBERON:0002780!3.63e-15!41;UBERON:0001890!3.63e-15!41;UBERON:0006240!3.63e-15!41;UBERON:0003080!9.45e-15!42;UBERON:0000955!3.83e-14!69;UBERON:0006238!3.83e-14!69;UBERON:0001869!4.19e-14!32;UBERON:0002791!1.28e-13!33;UBERON:0002020!3.15e-13!34;UBERON:0003528!3.15e-13!34;UBERON:0000153!1.50e-11!129;UBERON:0007811!1.50e-11!129;UBERON:0001017!2.22e-11!82;UBERON:0003075!7.32e-11!86;UBERON:0007284!7.32e-11!86;UBERON:0005743!1.07e-10!86;UBERON:0002346!3.18e-10!90;UBERON:0000033!8.99e-10!123;UBERON:0003056!2.05e-09!61;UBERON:0000073!2.28e-09!94;UBERON:0001016!2.28e-09!94;UBERON:0002619!1.92e-08!22;UBERON:0002308!2.09e-08!9;UBERON:0000125!2.09e-08!9;UBERON:0003408!7.56e-08!10;UBERON:0000956!2.28e-07!25;UBERON:0000203!2.28e-07!25;UBERON:0001950!6.31e-07!20;UBERON:0000988!8.80e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:117256221..117256231,+ | |short_description=p@chr12:117256221..117256231,+ | ||
}} | }} |
Latest revision as of 05:26, 24 July 2015
Short description: | p@chr12:117256221..117256231, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:117256221..117256231, + |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 5.42e-195 | 1 |
mature B cell | 1.55e-98 | 2 |
pre-B-II cell | 1.55e-98 | 2 |
transitional stage B cell | 1.55e-98 | 2 |
small pre-B-II cell | 1.55e-98 | 2 |
immature B cell | 1.55e-98 | 2 |
precursor B cell | 2.39e-66 | 3 |
B cell | 1.43e-15 | 14 |
lymphocyte of B lineage | 1.01e-09 | 24 |
pro-B cell | 1.01e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.42e-195 | 1 |
lymphosarcoma | 5.42e-195 | 1 |
lymphoma | 3.81e-21 | 10 |