FFCP PHASE1:Hg19::chr12:122294178..122294190,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000543848_5end | |association_with_transcript=13bp_to_ENST00000543848_5end | ||
|cluster_id=chr12:122294178..122294190,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_ENST00000543848_5end | |description=CAGE_peak_1_at_ENST00000543848_5end | ||
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|ontology_enrichment_celltype=CL:0000764!1.17e-33!2;CL:0000765!1.17e-33!2;CL:0000050!1.17e-33!2;CL:0000038!1.17e-33!2;CL:0000558!1.17e-33!2;CL:0000547!1.17e-33!2;CL:0000549!1.17e-33!2;CL:0000550!1.17e-33!2;CL:0000552!1.17e-33!2;CL:0000839!2.64e-14!70;CL:0002057!5.66e-14!42;CL:0000860!4.95e-13!45;CL:0002194!4.19e-09!63;CL:0000576!4.19e-09!63;CL:0000040!4.19e-09!63;CL:0000559!4.19e-09!63;CL:0002009!8.04e-09!65;CL:0000763!9.04e-09!112;CL:0000049!9.04e-09!112;CL:0000557!4.58e-08!71;CL:0002031!7.24e-08!124;CL:0000766!1.59e-07!76 | |ontology_enrichment_celltype=CL:0000764!1.17e-33!2;CL:0000765!1.17e-33!2;CL:0000050!1.17e-33!2;CL:0000038!1.17e-33!2;CL:0000558!1.17e-33!2;CL:0000547!1.17e-33!2;CL:0000549!1.17e-33!2;CL:0000550!1.17e-33!2;CL:0000552!1.17e-33!2;CL:0000839!2.64e-14!70;CL:0002057!5.66e-14!42;CL:0000860!4.95e-13!45;CL:0002194!4.19e-09!63;CL:0000576!4.19e-09!63;CL:0000040!4.19e-09!63;CL:0000559!4.19e-09!63;CL:0002009!8.04e-09!65;CL:0000763!9.04e-09!112;CL:0000049!9.04e-09!112;CL:0000557!4.58e-08!71;CL:0002031!7.24e-08!124;CL:0000766!1.59e-07!76 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.70e-17!1;UBERON:0003135!2.82e-14!11;UBERON:0000473!1.99e-09!8;UBERON:0003101!1.98e-07!22;UBERON:0000079!1.98e-07!22;UBERON:0002371!3.86e-07!80 | |ontology_enrichment_uberon=UBERON:0001301!1.70e-17!1;UBERON:0003135!2.82e-14!11;UBERON:0000473!1.99e-09!8;UBERON:0003101!1.98e-07!22;UBERON:0000079!1.98e-07!22;UBERON:0002371!3.86e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p1@ENST00000543848 | |short_description=p1@ENST00000543848 | ||
}} | }} |
Latest revision as of 06:01, 24 July 2015
Short description: | p1@ENST00000543848 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000543848_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 13bp_to_ENST00000543848_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |