FFCP PHASE1:Hg19::chr12:122710973..122711011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122710973..122711011,+ | |||
|description=CAGE_peak_at_chr12:122710973..122711011,+ | |description=CAGE_peak_at_chr12:122710973..122711011,+ | ||
|id=chr12:122710973..122711011,+ | |id=chr12:122710973..122711011,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000771;7.03e-11;2!CL:0000123;8.73e-11;2!CL:0000242;8.73e-11;2!CL:0002319;9.50e-10;25!CL:0000333;1.98e-09;5!CL:0000540;2.05e-07;6!CL:0000404;2.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,9.07e-12,59;CL:0000771,6.72e-11,2;CL:0000242,8.55e-11,2;CL:0002319,9.07e-10,25;CL:0000047,2.26e-09,8;CL:0000221,3.51e-09,72;CL:0000333,6.24e-09,41;CL:0000540,1.62e-07,6;CL:0000031,1.62e-07,6;CL:0000404,1.62e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.05e-07;6 | |||
|ontology_enrichment_disease=DOID:162!1.56e-12!235;DOID:14566!2.28e-12!239;DOID:0050686!5.44e-09!137;DOID:0050687!4.13e-08!143 | |ontology_enrichment_disease=DOID:162!1.56e-12!235;DOID:14566!2.28e-12!239;DOID:0050686!5.44e-09!137;DOID:0050687!4.13e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:169;5.04e-13;6!DOID:171;8.60e-12;10!DOID:3119;2.06e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.71e-13,6;DOID:171,6.73e-12,10;DOID:3119,2.01e-11,14;DOID:0050687,1.82e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.62e-12!94;UBERON:0001016!2.62e-12!94;UBERON:0005743!1.30e-11!86;UBERON:0001017!1.46e-11!82;UBERON:0002780!6.75e-11!41;UBERON:0001890!6.75e-11!41;UBERON:0006240!6.75e-11!41;UBERON:0001049!8.80e-11!57;UBERON:0005068!8.80e-11!57;UBERON:0006241!8.80e-11!57;UBERON:0007135!8.80e-11!57;UBERON:0001893!2.24e-10!34;UBERON:0003080!2.39e-10!42;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0001869!5.94e-10!32;UBERON:0002791!6.93e-10!33;UBERON:0000955!1.10e-09!69;UBERON:0006238!1.10e-09!69;UBERON:0002346!3.72e-08!90;UBERON:0002619!5.26e-08!22;UBERON:0000924!5.89e-08!173;UBERON:0006601!5.89e-08!173;UBERON:0002616!7.17e-08!59;UBERON:0003075!4.25e-07!86;UBERON:0007284!4.25e-07!86;UBERON:0004121!4.37e-07!169;UBERON:0001950!6.74e-07!20;UBERON:0000956!7.80e-07!25;UBERON:0000203!7.80e-07!25 | |ontology_enrichment_uberon=UBERON:0000073!2.62e-12!94;UBERON:0001016!2.62e-12!94;UBERON:0005743!1.30e-11!86;UBERON:0001017!1.46e-11!82;UBERON:0002780!6.75e-11!41;UBERON:0001890!6.75e-11!41;UBERON:0006240!6.75e-11!41;UBERON:0001049!8.80e-11!57;UBERON:0005068!8.80e-11!57;UBERON:0006241!8.80e-11!57;UBERON:0007135!8.80e-11!57;UBERON:0001893!2.24e-10!34;UBERON:0003080!2.39e-10!42;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0001869!5.94e-10!32;UBERON:0002791!6.93e-10!33;UBERON:0000955!1.10e-09!69;UBERON:0006238!1.10e-09!69;UBERON:0002346!3.72e-08!90;UBERON:0002619!5.26e-08!22;UBERON:0000924!5.89e-08!173;UBERON:0006601!5.89e-08!173;UBERON:0002616!7.17e-08!59;UBERON:0003075!4.25e-07!86;UBERON:0007284!4.25e-07!86;UBERON:0004121!4.37e-07!169;UBERON:0001950!6.74e-07!20;UBERON:0000956!7.80e-07!25;UBERON:0000203!7.80e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.98e-09;5!UBERON:0002410;1.98e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.87e-09,5;UBERON:0002410,1.87e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.534893840235659,0.328402357799783,0.865818594450472,0,0,0.309632246632152,0,0,0,0.542270404062111,0.568676929949686,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0.970336244751265,0.232429036905685,0,0.929119112685311,0.575384784644301,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0.674170453335254,0.612167784741805,0,0.639337125799041,0,0,0,0.580418477257168,0,0.622822248995575,0.502497330513487,0,0.868755378820466,1.21079900526674,1.47311054395026,0.949387162322653,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0,0.616804496998528,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0.443067789167242,0.270803863765016,0.25618263945135,0.650296737799391,0.164437904603676,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0,0.253019692019503,0.637130828648193,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.490385709340376,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0.207322110030741,0.504641701751257,0.72995471815166,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0.264145302039678,1.03664057770386,0.288239906833923,0.25248486685276,0.253991577168676,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0.394061520403854,0,0.641715181398742,0,1.30139853857622,3.09315525111078,1.34013012267479,1.91381625495949,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0.650756789328606,0.206082023295445,0.183138929636687,0.330037999682352,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.429680979473094,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.822724546172388,0,0.540031437238115,0,0.640944426764839,0,0,0.743212700502875,0.144269212976445,0.497992903438899,0.797131363644112,0.59873811429845,0,0.635020748171649,0.324621940274555,0,0.228234679033192,0.47003968731907,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0,0.671028323677248,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0,0.606802608747567,0.222886768554957,0.852408440419239,0,0,0.307160702099232,0.994147647766298,0.422008249231538,0.222617410045812,0.16480387422676,0.211125408127993,0,0,1.51159648712566,0.20453736500431,0.984678443688556,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0.174919999992391,0,0.341380344856499,0,0.472775363535873,3.44743373241465,1.74962768029953,1.56262495439963,0.885741385813839,0.241192877250816,0,0.221158519862449,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0,0,0.31396051279005,0,0.676786981851542,0.784250137270958,1.51039428278258,0.189753732724185,0,0,0.163232808159148,1.27217764290547,0.432777279484182,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0.208843899010911,0.471807930864739,0,0.234264445725339,0.547364367646998,0.586993856796269,0.242780379534093,0,0,0.30607276163049,0.063186579628488,8.26778806779709,0.518440956986236,0,0.330991955875499,0,0,0.284609546029793,0,0,0.0979923974143777,0.34823682632161,0,0.51595809741485,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0.696418755514666,0,0.0801588202515337,0,0.39961921916426,0.288180834308212,0.114536596165916,1.20116498503375,0,0.372757606696298,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0.600420288709789,0.684526894459965,0,0.429765441419957,0.262887354279314,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0.157566364614447,0.412079291905832,0.13480708770837,0.0984274815147488,0.508039992394707,2.38568906942791,0.544813624446302,0,0.550157746388935,0,0,0,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| ||
|short_description=p@chr12:122710973..122711011,+ | |short_description=p@chr12:122710973..122711011,+ | ||
}} | }} |
Latest revision as of 06:05, 24 July 2015
Short description: | p@chr12:122710973..122711011, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122710973..122711011, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 9.07e-12 | 59 |
eosinophil | 6.72e-11 | 2 |
Merkel cell | 8.55e-11 | 2 |
neural cell | 9.07e-10 | 25 |
neuronal stem cell | 2.26e-09 | 8 |
ectodermal cell | 3.51e-09 | 72 |
migratory neural crest cell | 6.24e-09 | 41 |
neuron | 1.62e-07 | 6 |
neuroblast | 1.62e-07 | 6 |
electrically signaling cell | 1.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.87e-09 | 5 |
autonomic nervous system | 1.87e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.71e-13 | 6 |
neuroectodermal tumor | 6.73e-12 | 10 |
gastrointestinal system cancer | 2.01e-11 | 14 |
cell type cancer | 1.82e-07 | 143 |