FFCP PHASE1:Hg19::chr12:125299559..125299586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:125299559..125299586,+ | |||
|description=CAGE_peak_at_chr12:125299559..125299586,+ | |description=CAGE_peak_at_chr12:125299559..125299586,+ | ||
|id=chr12:125299559..125299586,+ | |id=chr12:125299559..125299586,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.68e-10!254 | |ontology_enrichment_celltype=CL:0000066!1.68e-10!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.34e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.49e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.34e-10!143;DOID:14566!9.23e-10!239;DOID:162!2.17e-09!235;DOID:305!1.13e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.95e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.04e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.74e-23;9!UBERON:0001557;1.74e-23;9!UBERON:0002107;6.58e-12;19!UBERON:0006925;6.58e-12;19!UBERON:0002423;1.58e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.97e-24,9;UBERON:0001557,1.51e-12,19;UBERON:0002107,4.02e-12,19;UBERON:0006925,4.02e-12,19;UBERON:0008836,4.02e-12,19;UBERON:0008835,3.65e-10,22;UBERON:0003894,3.65e-10,22;UBERON:0009854,1.26e-09,23;UBERON:0001041,4.36e-09,87;UBERON:0007499,1.11e-08,25;UBERON:0009497,1.11e-08,25;UBERON:0000015,1.11e-08,25;UBERON:0002423,1.11e-08,25;UBERON:0006235,1.11e-08,25;UBERON:0004161,1.11e-08,25;UBERON:0009856,2.88e-08,26;UBERON:0005172,4.18e-07,54;UBERON:0005173,4.18e-07,54;UBERON:0002417,5.07e-07,60;UBERON:0000916,5.07e-07,60 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,0,1.34088328328186,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0,0.527533956456907,0.247532705920093,0.994192127183747,0.672325146451775,1.20538905604795,0,0.487932798790507,0.123121058076788,0.612002073732759,1.25381888591235,0.572471974262113,0.273748850145768,0.502170558379211,0.305653622991805,0.410502947249729,0.472264687882075,0,0,0,0,0,0.369754010166788,0.309868802321207,0.426507697462265,0,0,0.200544447470142,0.217010870715852,2.46307021663917,0.971680998056939,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.767175371061182,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.527008714158756,0.130979075497713,0.728590576585084,0.741568885568859,0,0.174129737299267,2.12732736830184,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0.694281003215189,0,0.838998872419812,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0.625098097988558,0.673588117878509,0.563057402416611,0,0,0.732806975721629,0,0,0.872188104285069,0.993943903390637,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0.74000264525148,0,0.404132016209064,0.326923806226917,0.454072282934794,2.30470369792,0,1.24864030732128,0,0.597794722207204,0.822041490506354,0.323745888736263,0.702254033511242,0.204154171254893,0.737005903870608,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.337552664482532,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0,0,0.286804595389004,0.487894824518382,0,0.348581828608555,0.414644220061482,0.504641701751257,0,0,0,0,0,0,2.48444280083672,1.85443159085912,2.6511213287183,3.41911315470421,3.4860711054785,3.32178866755535,3.64044532032444,2.15843611637881,1.53898862778556,0,0,0,1.47008711385542,3.80265104465493,3.9313088667105,4.13552934676983,0.441463099414651,0.245976877086227,1.02940686179115,0.768251997860379,0,0.804231779293047,0.0925884451585296,0,5.19967392639789,0,0.811512834825538,0.234817388471643,0,0,0,0,1.71697232418975,0.984868024349589,0.702012795417713,0.594524649154913,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,2.03193261734941,0.381988425558278,0,0,3.18765227380303,2.40274446275134,3.71574362419752,0.112131084345361,0.43596006883328,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.428933980974443,0.542621605391443,0,0,1.06617584622764,0.791951872933429,0,0,0.199945982364114,6.08118903205952,0.502257091432126,0,0,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0.560425719967636,0,0,0,0.254094624222463,0,0,0.670065061337395,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,1.03985430765404,0.356857977594324,0.788512075169673,0.585707074963566,0,0,0,0,0,0.173767228936166,0.979005787313703,1.02943027143257,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.64341568457443,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.40101294060657,0,0.229628896329213,0.364182336013434,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0,1.13733384070897,1.19065593693561,0,0,1.62567862526312,0.501689773854853,0,0,0,0,0,1.28225062558195,0.984043937099117,0.976135183992909,0.103041011647722,0.640986253728404,0.247528499761764,0,0.650060246036521,0,0.193341436584244,1.07834031980251,1.99554777143968,0.413509717453592,0.644521469209642,0.870100163485371,0.340906509664404,0,0.330569830721956,0.192190067365106,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,1.116475108079,0.632758849437452,1.5250415513906,0.255897791311334,0.855877976067841,0,0.78494864019923,0.179872457583315,0.823611089208164,1.06031162111118,0,0,0.421258456238981,0.975267478179181,0,0,0.272999822815972,0.848432591722276,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0.430234056612155,0.392996164052485,0,0.709522128141196,0.422215270595328,0.329294892959902,0.379473173765715,1.04980416073495,0,0.670302275535787,0,0.941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,1.47024129588619,0.185803175125719,0.144269212976445,0,0.637705090915289,0,0,0,0,0,0.912938716132769,0.47003968731907,0,0.50787533340481,0,0,0,0,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0.540911356951966,0,0,0.18714054040822,0.146508179271894,0.485442086998054,0,0.568272293612826,0.47748896947538,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0.398495976502139,0,0.503865495708552,0,0.369254416383208,0,0.0898683511473268,0,0.511572370226872,0.493217028184668,0,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| ||
|short_description=p@chr12:125299559..125299586,+ | |short_description=p@chr12:125299559..125299586,+ | ||
}} | }} |
Latest revision as of 06:28, 24 July 2015
Short description: | p@chr12:125299559..125299586, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:125299559..125299586, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.49e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.97e-24 | 9 |
upper respiratory tract | 1.51e-12 | 19 |
liver | 4.02e-12 | 19 |
digestive gland | 4.02e-12 | 19 |
liver bud | 4.02e-12 | 19 |
hepatic diverticulum | 3.65e-10 | 22 |
liver primordium | 3.65e-10 | 22 |
digestive tract diverticulum | 1.26e-09 | 23 |
foregut | 4.36e-09 | 87 |
epithelial sac | 1.11e-08 | 25 |
epithelium of foregut-midgut junction | 1.11e-08 | 25 |
anatomical boundary | 1.11e-08 | 25 |
hepatobiliary system | 1.11e-08 | 25 |
foregut-midgut junction | 1.11e-08 | 25 |
septum transversum | 1.11e-08 | 25 |
sac | 2.88e-08 | 26 |
abdomen element | 4.18e-07 | 54 |
abdominal segment element | 4.18e-07 | 54 |
abdominal segment of trunk | 5.07e-07 | 60 |
abdomen | 5.07e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.95e-07 | 106 |