FFCP PHASE1:Hg19::chr12:19610636..19610653,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-54bp_to_ENST00000359165_5end | |||
|cluster_id=chr12:19610636..19610653,- | |||
|coexpression_cluster_id=C408 | |||
|description=CAGE_peak_1_at_ENST00000359165_5end | |||
|id=chr12:19610636..19610653,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000767;1.85e-12;3!CL:0002564;2.59e-12;3!CL:0000197;8.48e-07;6!CL:0000098;8.48e-07;6!CL:0002167;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.85e-12,3;CL:0002564,3.24e-12,3;CL:0000197,8.02e-07,6;CL:0000098,8.02e-07,6;CL:0002167,8.02e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;9.07e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,6.48e-18,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;2.59e-12;3!UBERON:0011135;6.55e-08;5!UBERON:0002216;6.55e-08;5!UBERON:0011134;6.55e-08;5!UBERON:0002209;6.55e-08;5!UBERON:0002213;6.55e-08;5!UBERON:0007844;6.55e-08;5!UBERON:0011138;6.55e-08;5!UBERON:0001130;6.55e-08;5!UBERON:0001066;6.55e-08;5!UBERON:0001468;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,3.24e-12,3;UBERON:0003068,3.24e-12,3;UBERON:0002328,3.24e-12,3;UBERON:0004880,3.24e-12,3;UBERON:0011135,7.49e-08,5;UBERON:0002216,7.49e-08,5;UBERON:0011134,7.49e-08,5;UBERON:0002209,7.49e-08,5;UBERON:0002213,7.49e-08,5;UBERON:0005856,7.49e-08,5;UBERON:0005866,7.49e-08,5;UBERON:0005863,7.49e-08,5;UBERON:0007844,7.49e-08,5;UBERON:0011138,7.49e-08,5;UBERON:0001130,7.49e-08,5;UBERON:0001066,7.49e-08,5;UBERON:0001468,7.49e-08,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,19.6616476611417,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.28769239232215,0,0.709446689665756,0,0.645484683583826,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0.398927315243264,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.759059076058509,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0.323745888736263,0,0.61246251376468,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.45071417671979,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.593929361665277,0,0,0,0,0,0,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.113942055847001,0.23056390438806,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720273989940749,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0,0.316801009558219,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0.13223260174269,0.513260513652988,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,1.04349012362347,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,1.24415452006595,0,0,0,0.109209638192014,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.12729431655633,0,0,0,0.134704106029175,0,0,0,0,1.9307228228694,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000359165 | |||
}} |
Latest revision as of 07:24, 24 July 2015
Short description: | p1@ENST00000359165 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000359165_5end |
Coexpression cluster: | C408_Basophils_CD14_amniotic_nasal_Natural_mature_CD34 |
Association with transcript: | -54bp_to_ENST00000359165_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.85e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 3.24e-12 | 3 |
receptor cell | 8.02e-07 | 6 |
sensory epithelial cell | 8.02e-07 | 6 |
olfactory epithelial cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 3.24e-12 | 3 |
axial mesoderm | 3.24e-12 | 3 |
notochord | 3.24e-12 | 3 |
chordamesoderm | 3.24e-12 | 3 |
intervertebral cartilage | 7.49e-08 | 5 |
symphysis | 7.49e-08 | 5 |
nonsynovial joint | 7.49e-08 | 5 |
fibrous joint | 7.49e-08 | 5 |
cartilaginous joint | 7.49e-08 | 5 |
developing mesenchymal condensation | 7.49e-08 | 5 |
pre-cartilage condensation | 7.49e-08 | 5 |
cartilaginous condensation | 7.49e-08 | 5 |
cartilage element | 7.49e-08 | 5 |
post-cranial axial skeletal system | 7.49e-08 | 5 |
vertebral column | 7.49e-08 | 5 |
intervertebral disk | 7.49e-08 | 5 |
intervertebral joint | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
teratoma | 6.48e-18 | 2 |