FFCP PHASE1:Hg19::chr12:23908625..23908650,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:23908625..23908650,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_at_chr12:23908625..23908650,- | |description=CAGE_peak_at_chr12:23908625..23908650,- | ||
|id=chr12:23908625..23908650,- | |id=chr12:23908625..23908650,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.78e-29;7!CL:0000586;1.78e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.78e-29,7;CL:0000586,1.78e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |||
|ontology_enrichment_disease=DOID:3151!4.07e-08!1;DOID:3149!4.07e-08!1;DOID:3371!1.35e-07!1;DOID:4549!1.35e-07!1;DOID:5861!1.35e-07!1;DOID:6496!1.35e-07!1 | |ontology_enrichment_disease=DOID:3151!4.07e-08!1;DOID:3149!4.07e-08!1;DOID:3371!1.35e-07!1;DOID:4549!1.35e-07!1;DOID:5861!1.35e-07!1;DOID:6496!1.35e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000988!1.11e-09!3;UBERON:0006331!1.32e-09!3;UBERON:0001049!1.44e-09!57;UBERON:0005068!1.44e-09!57;UBERON:0006241!1.44e-09!57;UBERON:0007135!1.44e-09!57;UBERON:0002418!2.21e-09!3;UBERON:0004755!2.21e-09!3;UBERON:0002020!3.02e-08!34;UBERON:0003528!3.02e-08!34;UBERON:0000996!3.10e-08!1;UBERON:0002298!6.81e-08!8;UBERON:0002038!7.45e-08!1;UBERON:0009661!7.45e-08!1;UBERON:0001871!9.26e-08!7;UBERON:0001950!1.49e-07!20;UBERON:0002616!2.28e-07!59;UBERON:0003075!4.44e-07!86;UBERON:0007284!4.44e-07!86;UBERON:0002619!7.12e-07!22;UBERON:0002780!8.81e-07!41;UBERON:0001890!8.81e-07!41;UBERON:0006240!8.81e-07!41 | |ontology_enrichment_uberon=UBERON:0000988!1.11e-09!3;UBERON:0006331!1.32e-09!3;UBERON:0001049!1.44e-09!57;UBERON:0005068!1.44e-09!57;UBERON:0006241!1.44e-09!57;UBERON:0007135!1.44e-09!57;UBERON:0002418!2.21e-09!3;UBERON:0004755!2.21e-09!3;UBERON:0002020!3.02e-08!34;UBERON:0003528!3.02e-08!34;UBERON:0000996!3.10e-08!1;UBERON:0002298!6.81e-08!8;UBERON:0002038!7.45e-08!1;UBERON:0009661!7.45e-08!1;UBERON:0001871!9.26e-08!7;UBERON:0001950!1.49e-07!20;UBERON:0002616!2.28e-07!59;UBERON:0003075!4.44e-07!86;UBERON:0007284!4.44e-07!86;UBERON:0002619!7.12e-07!22;UBERON:0002780!8.81e-07!41;UBERON:0001890!8.81e-07!41;UBERON:0006240!8.81e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.22e-26;8!UBERON:0003135;2.25e-19;11!UBERON:0000991;6.74e-11;21!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22!UBERON:0002323;2.32e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-26,8;UBERON:0003135,2.25e-19,11;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22 | |||
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|short_description=p@chr12:23908625..23908650,- | |short_description=p@chr12:23908625..23908650,- | ||
}} | }} |
Latest revision as of 07:37, 24 July 2015
Short description: | p@chr12:23908625..23908650, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:23908625..23908650, - |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.78e-29 | 7 |
germ cell | 1.78e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.22e-26 | 8 |
male reproductive organ | 2.25e-19 | 11 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |